Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC016065.2-201ENST00000514530 444 ntBASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 RNU6-56P-201ENST00000516986 93 ntBASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 U8.9-201ENST00000365667 134 ntBASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 OR11H5P-201ENST00000554039 926 ntBASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 AC020895.1-201ENST00000595362 272 ntBASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 AL355812.1-201ENST00000603215 216 ntBASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.29□□□□□ -2.04
SCN10AQ9Y5Y9 AC011460.1-201ENST00000636268 1834 ntBASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 AC006378.2-201ENST00000623178 2476 ntBASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 FO393419.3-201ENST00000428741 282 ntBASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 XKRYP6-201ENST00000440468 1116 ntBASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 XKRYP3-201ENST00000442113 1116 ntBASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 RPS26P56-201ENST00000444468 240 ntBASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 AC092685.1-201ENST00000447960 1243 ntBASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 AP000705.1-201ENST00000454567 350 ntBASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 SNRPGP16-201ENST00000533275 226 ntBASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 AC027104.1-201ENST00000563702 681 ntBASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 MAGOH2P-202ENST00000584384 429 ntBASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 RPL23AP88-201ENST00000605759 454 ntBASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 AC018755.4-201ENST00000619715 454 ntBASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 AC006249.1-201ENST00000621223 471 ntBASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 AC073348.1-201ENST00000623002 331 ntBASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 AC244517.12-201ENST00000623581 663 ntBASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 AC090617.7-201ENST00000623952 126 ntBASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.28□□□□□ -2.04
SCN10AQ9Y5Y9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 MTND4P35-201ENST00000604257 1375 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 AL355578.1-201ENST00000607405 1328 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 Y_RNA.164-201ENST00000363709 102 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 SNORA26.9-201ENST00000391322 122 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 PRRC2CP1-201ENST00000404428 159 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 OFD1P18Y-201ENST00000420889 959 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 USP9YP8-201ENST00000441913 500 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 RPL38P4-201ENST00000502376 214 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 RNU6-826P-201ENST00000516827 104 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 MIR5002-201ENST00000584713 97 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 DHFRP5-201ENST00000406944 564 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 MIR1303-201ENST00000408625 86 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 AC096533.1-201ENST00000411645 353 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 HMGN2P30-201ENST00000423237 256 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 AC025181.1-201ENST00000477507 416 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 SNORA31.8-201ENST00000516327 108 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 SNORA31.20-201ENST00000517111 133 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 AC087373.1-201ENST00000524920 491 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 OR10V3P-201ENST00000525712 725 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 AMZ2P1-203ENST00000565833 850 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 AP001004.1-201ENST00000582468 324 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 AL355810.1-201ENST00000614629 552 ntBASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.27□□□□□ -2.05
SCN10AQ9Y5Y9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SCN10AQ9Y5Y9 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SCN10AQ9Y5Y9 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.26□□□□□ -2.05
SCN10AQ9Y5Y9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.26□□□□□ -2.05
SCN10AQ9Y5Y9 AC005005.2-201ENST00000420779 380 ntBASIC2.26□□□□□ -2.05
SCN10AQ9Y5Y9 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.26□□□□□ -2.05
SCN10AQ9Y5Y9 RABEPKP1-201ENST00000440529 1026 ntBASIC2.26□□□□□ -2.05
SCN10AQ9Y5Y9 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.26□□□□□ -2.05
SCN10AQ9Y5Y9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.26□□□□□ -2.05
SCN10AQ9Y5Y9 SNORA31.26-201ENST00000517250 137 ntBASIC2.26□□□□□ -2.05
SCN10AQ9Y5Y9 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.26□□□□□ -2.05
SCN10AQ9Y5Y9 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.26□□□□□ -2.05
SCN10AQ9Y5Y9 AC060766.3-201ENST00000591442 263 ntBASIC2.26□□□□□ -2.05
SCN10AQ9Y5Y9 YWHAQP7-201ENST00000603536 658 ntBASIC2.26□□□□□ -2.05
SCN10AQ9Y5Y9 AC079610.2-201ENST00000604818 690 ntBASIC2.26□□□□□ -2.05
SCN10AQ9Y5Y9 HSPE1P14-201ENST00000605812 302 ntBASIC2.26□□□□□ -2.05
SCN10AQ9Y5Y9 AC120053.1-201ENST00000607706 736 ntBASIC2.26□□□□□ -2.05
SCN10AQ9Y5Y9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
SCN10AQ9Y5Y9 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms