Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA3Q9Y5H0 AL133412.1-201ENST00000380194 2992 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 AP001350.1-201ENST00000601906 1524 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU5E-6P-201ENST00000365574 115 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 Y_RNA.409-201ENST00000383990 98 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 AC110754.1-201ENST00000399740 601 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 MIR1193-201ENST00000408109 78 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU2-39P-201ENST00000410604 198 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 VDAC1P9-201ENST00000412766 841 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 RPL7AP25-201ENST00000423357 805 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 MTCO1P20-201ENST00000425366 358 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 DUTP6-201ENST00000425573 462 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 ELOCP14-201ENST00000428070 331 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 ELOCP7-201ENST00000439968 331 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 MTCO3P18-201ENST00000440206 761 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 RBMX2P4-201ENST00000441256 376 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 AL356010.1-201ENST00000456364 102 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU6-261P-201ENST00000459506 102 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 RN7SL432P-201ENST00000484057 298 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 AC117522.1-201ENST00000509821 380 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 HMGB1P41-201ENST00000520234 440 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 OR4H12P-201ENST00000556269 907 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 NCAPGP2-201ENST00000557911 754 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 FAM60BP-201ENST00000578364 658 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 NRBF2P5-201ENST00000603087 788 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 AL139395.1-201ENST00000603662 160 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 AC025449.1-201ENST00000603896 529 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 AC012443.1-201ENST00000605605 231 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 AC002553.4-201ENST00000616896 331 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 U6.42-201ENST00000618440 107 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 AL360181.4-201ENST00000621752 134 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 AC110801.1-201ENST00000623590 212 ntBASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDHGA3Q9Y5H0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 MTND5P17-201ENST00000418405 1603 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 RNA5SP479-201ENST00000364858 117 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU4-48P-201ENST00000365559 182 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU6-74P-201ENST00000384235 107 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 RPL17P36-201ENST00000420302 549 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 PDSS1P1-201ENST00000422953 1114 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 RAC1P6-201ENST00000423911 575 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 RPL7P54-201ENST00000438336 674 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 CALM1P1-201ENST00000442082 433 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 AC104651.2-201ENST00000447549 528 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 RPS11P1-201ENST00000451072 473 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 SNRPGP6-201ENST00000451124 220 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 RPS7P7-201ENST00000463499 571 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 AC083798.1-201ENST00000472671 131 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 RN7SL41P-201ENST00000476144 297 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 AC110792.1-201ENST00000491826 472 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 AC078918.1-201ENST00000498515 228 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU6-1281P-201ENST00000516223 105 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU6-840P-201ENST00000517275 65 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 OR5BN1P-201ENST00000532955 829 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 FKBP1BP1-201ENST00000553366 325 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 AL109766.1-201ENST00000555080 552 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 MIR3138-201ENST00000585238 82 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 uc_338.11-201ENST00000619132 160 ntBASIC4.37□□□□□ -1.71
PCDHGA3Q9Y5H0 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms