Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSX2IPQ9Y2D8 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 AC066616.2-201ENST00000559334 1481 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 RNU6-730P-201ENST00000383954 104 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 MIR449B-201ENST00000384995 97 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 MTCO3P40-201ENST00000392516 676 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 MRPL42P2-201ENST00000403169 426 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 SNORA57.3-201ENST00000411095 141 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 AL589872.1-201ENST00000426602 288 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 ISCA1P6-201ENST00000427740 390 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 PSMA6P3-201ENST00000428242 164 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 OR4F13P-201ENST00000428478 931 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 HMGB3P22-202ENST00000451823 572 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 RAD23BP3-201ENST00000454157 1152 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 AP1S2P1-201ENST00000457344 379 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 AP001992.1-205ENST00000462248 379 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 AL121769.1-201ENST00000469473 401 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 RN7SL271P-201ENST00000487601 295 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 AC116353.2-201ENST00000505332 712 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 PRDX4P1-201ENST00000507189 574 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 PTGES3P3-201ENST00000511479 482 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 AC093853.1-201ENST00000515689 483 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 AC068135.2-201ENST00000569293 1028 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 MIR6868-201ENST00000611215 58 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 AL596245.1-201ENST00000618994 362 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 AC244258.1-201ENST00000637553 1071 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 AC010149.2-201ENST00000637608 315 ntBASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSX2IPQ9Y2D8 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 Y_RNA.372-201ENST00000365599 102 ntBASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 SNORD115-47-201ENST00000391226 86 ntBASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 RNA5SP306-201ENST00000411087 107 ntBASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 AC233728.2-201ENST00000425348 757 ntBASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 AL353777.1-201ENST00000425552 326 ntBASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 DPPA2P1-201ENST00000428060 556 ntBASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 AL358934.1-201ENST00000432346 324 ntBASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 AC000111.3-201ENST00000433478 193 ntBASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 Z99127.3-201ENST00000448158 395 ntBASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 MTCO3P20-201ENST00000454926 688 ntBASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 snoU13.8-201ENST00000458890 104 ntBASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 RPL7L1P8-201ENST00000469911 741 ntBASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 AC010342.1-201ENST00000514047 877 ntBASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 RNA5SP309-201ENST00000516670 106 ntBASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 RNA5SP143-201ENST00000516936 115 ntBASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 MIR3944-201ENST00000581277 108 ntBASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 AP001596.2-201ENST00000608410 312 ntBASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 AC009159.1-201ENST00000618386 642 ntBASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 AL359880.1-201ENST00000621879 266 ntBASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.31□□□□□ -1.72
SSX2IPQ9Y2D8 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 NUP58P1-201ENST00000502546 1738 ntBASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
SSX2IPQ9Y2D8 Y_RNA.88-201ENST00000363029 99 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms