Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 SETP11-201ENST00000473027 690 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 RN7SL297P-201ENST00000483161 293 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 RPL9P33-201ENST00000484311 566 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AP001025.2-201ENST00000490908 477 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 KLRA1P-201ENST00000503499 986 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AC091826.1-201ENST00000514065 313 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.28□□□□□ -1.88
SMC3Q9UQE7 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AC138761.3-201ENST00000579993 334 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AL445435.1-201ENST00000604232 665 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AC106900.2-201ENST00000604994 317 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AF129408.1-201ENST00000608767 431 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AC106028.5-201ENST00000610332 395 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 CYCSP41-201ENST00000616920 296 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 AP003485.1-201ENST00000625093 753 ntBASIC3.28□□□□□ -1.88
SMC3Q9UQE7 MIR26A1-201ENST00000362205 77 ntBASIC3.27□□□□□ -1.89
SMC3Q9UQE7 MIR422A-201ENST00000362286 90 ntBASIC3.27□□□□□ -1.89
SMC3Q9UQE7 RNU6-1300P-201ENST00000391046 108 ntBASIC3.27□□□□□ -1.89
SMC3Q9UQE7 RNU6-1000P-201ENST00000391066 106 ntBASIC3.27□□□□□ -1.89
SMC3Q9UQE7 RNA5SP252-201ENST00000391131 119 ntBASIC3.27□□□□□ -1.89
SMC3Q9UQE7 AL079342.2-201ENST00000403367 482 ntBASIC3.27□□□□□ -1.89
SMC3Q9UQE7 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMC3Q9UQE7 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.27□□□□□ -1.89
SMC3Q9UQE7 AL513477.1-202ENST00000417061 214 ntBASIC3.27□□□□□ -1.89
SMC3Q9UQE7 DPRXP1-201ENST00000426312 460 ntBASIC3.27□□□□□ -1.89
SMC3Q9UQE7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.27□□□□□ -1.89
SMC3Q9UQE7 RPS20P5-201ENST00000434808 360 ntBASIC3.27□□□□□ -1.89
SMC3Q9UQE7 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.27□□□□□ -1.89
SMC3Q9UQE7 OR6K5P-201ENST00000447050 945 ntBASIC3.27□□□□□ -1.89
SMC3Q9UQE7 GSTA11P-201ENST00000452866 669 ntBASIC3.27□□□□□ -1.89
SMC3Q9UQE7 AC083906.5-201ENST00000503722 328 ntBASIC3.27□□□□□ -1.89
SMC3Q9UQE7 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMC3Q9UQE7 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.27□□□□□ -1.89
SMC3Q9UQE7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMC3Q9UQE7 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.27□□□□□ -1.89
SMC3Q9UQE7 GMPSP1-201ENST00000514075 579 ntBASIC3.27□□□□□ -1.89
SMC3Q9UQE7 SNORA48.10-201ENST00000516965 160 ntBASIC3.27□□□□□ -1.89
SMC3Q9UQE7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.27□□□□□ -1.89
SMC3Q9UQE7 DEFB130C-202ENST00000530001 230 ntBASIC3.27□□□□□ -1.89
SMC3Q9UQE7 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.27□□□□□ -1.89
SMC3Q9UQE7 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.27□□□□□ -1.89
SMC3Q9UQE7 AC024933.1-201ENST00000608472 348 ntBASIC3.27□□□□□ -1.89
SMC3Q9UQE7 AL159169.3-201ENST00000608871 561 ntBASIC3.27□□□□□ -1.89
SMC3Q9UQE7 AC092954.1-201ENST00000609121 445 ntBASIC3.27□□□□□ -1.89
SMC3Q9UQE7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SMC3Q9UQE7 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMC3Q9UQE7 SNORD21-201ENST00000383953 95 ntBASIC3.26□□□□□ -1.89
SMC3Q9UQE7 MIR620-201ENST00000385232 95 ntBASIC3.26□□□□□ -1.89
SMC3Q9UQE7 ARF4P3-201ENST00000397387 509 ntBASIC3.26□□□□□ -1.89
SMC3Q9UQE7 MTCO1P56-201ENST00000401674 224 ntBASIC3.26□□□□□ -1.89
SMC3Q9UQE7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.26□□□□□ -1.89
SMC3Q9UQE7 MTND4P3-201ENST00000417829 541 ntBASIC3.26□□□□□ -1.89
SMC3Q9UQE7 RPL7P30-201ENST00000420888 709 ntBASIC3.26□□□□□ -1.89
SMC3Q9UQE7 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.26□□□□□ -1.89
SMC3Q9UQE7 MTCO1P3-201ENST00000429327 192 ntBASIC3.26□□□□□ -1.89
SMC3Q9UQE7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SMC3Q9UQE7 AC112653.1-201ENST00000443851 386 ntBASIC3.26□□□□□ -1.89
SMC3Q9UQE7 AC013828.1-201ENST00000481845 158 ntBASIC3.26□□□□□ -1.89
SMC3Q9UQE7 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.26□□□□□ -1.89
SMC3Q9UQE7 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.26□□□□□ -1.89
SMC3Q9UQE7 CAB39P1-201ENST00000502277 460 ntBASIC3.26□□□□□ -1.89
SMC3Q9UQE7 CBX3P3-201ENST00000508108 532 ntBASIC3.26□□□□□ -1.89
SMC3Q9UQE7 RPPH1-2P-201ENST00000516688 293 ntBASIC3.26□□□□□ -1.89
SMC3Q9UQE7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.26□□□□□ -1.89
SMC3Q9UQE7 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.26□□□□□ -1.89
SMC3Q9UQE7 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.26□□□□□ -1.89
SMC3Q9UQE7 MIR5708-201ENST00000579723 85 ntBASIC3.26□□□□□ -1.89
SMC3Q9UQE7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.26□□□□□ -1.89
SMC3Q9UQE7 AC010620.2-201ENST00000600135 313 ntBASIC3.26□□□□□ -1.89
SMC3Q9UQE7 U73023.1-201ENST00000603134 700 ntBASIC3.26□□□□□ -1.89
SMC3Q9UQE7 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.26□□□□□ -1.89
SMC3Q9UQE7 MIR92B-201ENST00000607575 96 ntBASIC3.26□□□□□ -1.89
SMC3Q9UQE7 AC018645.2-201ENST00000609151 472 ntBASIC3.26□□□□□ -1.89
SMC3Q9UQE7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.26□□□□□ -1.89
SMC3Q9UQE7 MIR3651-201ENST00000630427 90 ntBASIC3.26□□□□□ -1.89
SMC3Q9UQE7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SMC3Q9UQE7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
SMC3Q9UQE7 FAM35BP-202ENST00000497389 3337 ntBASIC3.26□□□□□ -1.89
SMC3Q9UQE7 MTND5P1-201ENST00000445440 1375 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMC3Q9UQE7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SMC3Q9UQE7 AL672167.1-206ENST00000356293 943 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 NACA3P-201ENST00000359690 648 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 RNU5D-1-201ENST00000363299 116 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 RNU6-707P-201ENST00000364647 95 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 SUGT1P1-201ENST00000379514 476 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 RNU6-298P-201ENST00000390888 96 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 Y_RNA.578-201ENST00000390903 88 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.25□□□□□ -1.89
SMC3Q9UQE7 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.25□□□□□ -1.89
SMC3Q9UQE7 RAC1P8-201ENST00000427086 527 ntBASIC3.25□□□□□ -1.89
SMC3Q9UQE7 AL512649.1-201ENST00000428997 581 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms