Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 U3.29-201ENST00000391296 212 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 MTCYBP36-201ENST00000404146 440 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 NDUFB4P4-201ENST00000404822 243 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 Z92545.1-201ENST00000411782 234 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AC007899.1-201ENST00000412776 775 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 CDK8P2-201ENST00000415020 547 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AC012065.2-201ENST00000421295 375 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AL391219.1-201ENST00000422570 483 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 LSM1P1-201ENST00000438629 273 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 USP9YP29-201ENST00000445112 563 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AC008155.2-201ENST00000464337 397 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AC104563.1-201ENST00000476147 376 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 OR5AP1P-201ENST00000529730 940 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AC013828.2-201ENST00000532487 235 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 EEF1B2P4-201ENST00000551398 348 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AL121603.1-201ENST00000553815 142 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AGGF1P4-201ENST00000568249 801 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AC005951.1-201ENST00000576706 485 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 MIR4644-201ENST00000579929 84 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AC079089.3-201ENST00000603094 673 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AC103710.3-201ENST00000608157 948 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AC093591.3-201ENST00000634516 308 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AC084035.1-201ENST00000634543 607 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 AC027287.1-201ENST00000553115 1453 ntBASIC5.71□□□□□ -1.5
CDK11AQ9UQ88 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 Y_RNA.505-201ENST00000384489 102 ntBASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 RNU6-878P-201ENST00000384578 110 ntBASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 MUPP-201ENST00000438111 566 ntBASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 CYCSP32-201ENST00000440548 321 ntBASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 BX510359.1-201ENST00000456973 237 ntBASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 RN7SL807P-201ENST00000470923 297 ntBASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 NCAPGP2-201ENST00000557911 754 ntBASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 AC068790.6-201ENST00000602558 258 ntBASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 AC009509.4-201ENST00000619202 509 ntBASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 AL445264.1-201ENST00000621719 171 ntBASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 AC097714.1-201ENST00000511272 1647 ntBASIC5.7□□□□□ -1.5
CDK11AQ9UQ88 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 U8.14-201ENST00000390843 143 ntBASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 RNU2-16P-201ENST00000410712 136 ntBASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 MTATP6P27-201ENST00000416987 621 ntBASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 RPL21P32-201ENST00000419877 477 ntBASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 BX322784.1-201ENST00000455793 1077 ntBASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 SUMO2P2-201ENST00000456482 255 ntBASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 snoU109.4-201ENST00000458953 143 ntBASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 RPL23AP62-201ENST00000463396 453 ntBASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 MIR544B-201ENST00000582372 78 ntBASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 AC005000.2-201ENST00000605468 310 ntBASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
CDK11AQ9UQ88 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 RNU4-75P-201ENST00000364621 146 ntBASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 RN7SKP56-201ENST00000410513 331 ntBASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 GLRXP1-201ENST00000423261 334 ntBASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 AC005019.1-201ENST00000436455 431 ntBASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 SKP1P1-201ENST00000438081 489 ntBASIC5.68□□□□□ -1.5
CDK11AQ9UQ88 ARL2BPP4-201ENST00000506854 471 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms