Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 RNU6-1266P-201ENST00000362794 105 ntBASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 RNU4-42P-201ENST00000364738 142 ntBASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 Y_RNA.398-201ENST00000383952 99 ntBASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 RNU6-394P-201ENST00000410735 107 ntBASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 Z99755.1-201ENST00000414048 380 ntBASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 AL590632.1-201ENST00000424289 371 ntBASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 UBE2D3P2-201ENST00000424409 445 ntBASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 AC011753.3-201ENST00000443436 406 ntBASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 KNOP1P3-201ENST00000446933 426 ntBASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 RNU6-307P-201ENST00000516743 106 ntBASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 RN7SKP260-201ENST00000516907 149 ntBASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 AC100784.1-201ENST00000522790 310 ntBASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 AC103705.1-201ENST00000619013 241 ntBASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 AL159153.1-201ENST00000619688 317 ntBASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PDZRN3Q9UPQ7 AC093311.1-201ENST00000506586 2021 ntBASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 AL450345.1-202ENST00000605741 3881 ntBASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 RNU6-249P-201ENST00000363016 102 ntBASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 RNU6-1303P-201ENST00000364841 107 ntBASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 MIR105-1-201ENST00000385222 81 ntBASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 U3.39-201ENST00000408569 239 ntBASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 AC004866.2-201ENST00000438285 481 ntBASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 UBE2V1P5-201ENST00000440070 405 ntBASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 TXNP5-201ENST00000441043 315 ntBASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 AC245028.2-201ENST00000458673 253 ntBASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 AC034222.1-201ENST00000494052 532 ntBASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 IGKV1-32-201ENST00000519290 311 ntBASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 MIR4643-201ENST00000577473 78 ntBASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 MIR4737-201ENST00000583979 81 ntBASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 AC005899.2-201ENST00000584353 90 ntBASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 AL078605.1-201ENST00000603529 500 ntBASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 AL162431.4-201ENST00000604674 411 ntBASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 AC009229.4-201ENST00000623854 1947 ntBASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.62□□□□□ -1.35
PDZRN3Q9UPQ7 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 RBPJP2-201ENST00000618187 1444 ntBASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 SDAD1P1-202ENST00000524156 2051 ntBASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 RNU4-50P-201ENST00000364361 141 ntBASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 RN7SKP16-201ENST00000410180 299 ntBASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 AC068533.1-201ENST00000418542 415 ntBASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 AC091390.1-201ENST00000433904 331 ntBASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 OR4C10P-201ENST00000434991 931 ntBASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 HSPD1P21-201ENST00000436541 245 ntBASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 RNA5SP503-201ENST00000517047 117 ntBASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 HMGN1P28-201ENST00000521340 364 ntBASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 AC090502.2-201ENST00000549267 280 ntBASIC6.61□□□□□ -1.35
PDZRN3Q9UPQ7 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms