Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
NPIPA1Q9UND3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
NPIPA1Q9UND3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.9□□□□□ -1.95
NPIPA1Q9UND3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 FRG1BP-201ENST00000278882 761 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 OR1S2-201ENST00000302592 978 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 RNU1-140P-201ENST00000365040 165 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 RNU2-43P-201ENST00000410306 190 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 RNU6-1077P-201ENST00000410506 102 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 AC006960.1-201ENST00000419980 153 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 RPL35AP12-201ENST00000425362 338 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 RPL21P40-201ENST00000428586 483 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 AL353705.1-201ENST00000433468 480 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 MTND4P6-201ENST00000438297 472 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 SDCBPP1-201ENST00000440192 890 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 EXOSC3P1-201ENST00000448649 500 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 AC140076.1-201ENST00000449897 361 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 AC093677.1-201ENST00000514414 678 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 RNA5SP380-201ENST00000517190 98 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 AC009812.2-201ENST00000517657 457 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 AL512347.1-201ENST00000566420 503 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 AC055876.1-202ENST00000567053 138 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 MIR2682-201ENST00000580305 110 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 BNIP3P26-201ENST00000600827 554 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 AC106791.2-201ENST00000604680 391 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 API5P2-201ENST00000397055 1498 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 CUL1P1-201ENST00000509510 2425 ntBASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.89□□□□□ -1.95
NPIPA1Q9UND3 AC103988.1-201ENST00000566382 2177 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 U3.11-201ENST00000364476 212 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 DYNLT3P1-201ENST00000378574 347 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 TIMM9P2-201ENST00000419324 266 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 HSPE1P1-201ENST00000421494 318 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 MTCO2P5-201ENST00000422621 426 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 AL354692.1-201ENST00000423044 315 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 MTATP6P4-201ENST00000427725 675 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 EEF1A1P39-201ENST00000440791 250 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 MTCO2P25-201ENST00000447065 681 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 AC007327.1-201ENST00000447461 264 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 AC125238.1-201ENST00000448842 249 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 RPL36AP33-201ENST00000450395 310 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 RPL31P60-201ENST00000478450 367 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 AC068724.1-201ENST00000487100 792 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 AC080014.1-201ENST00000496877 1201 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 AC017037.2-201ENST00000513850 890 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 RN7SKP282-201ENST00000516824 299 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 SNORD59.2-201ENST00000516873 68 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 AC239860.2-201ENST00000525886 270 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 AC034268.2-201ENST00000571784 482 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 MIR6852-201ENST00000621699 66 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 AC099506.2-201ENST00000623074 221 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 AL137790.1-201ENST00000634283 177 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 AC011460.1-201ENST00000636268 1834 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 AC090740.1-201ENST00000623193 2262 ntBASIC2.88□□□□□ -1.95
NPIPA1Q9UND3 FAM35CP-201ENST00000554755 2470 ntBASIC2.87□□□□□ -1.95
NPIPA1Q9UND3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
NPIPA1Q9UND3 AL022578.1-201ENST00000439330 1433 ntBASIC2.87□□□□□ -1.95
NPIPA1Q9UND3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NPIPA1Q9UND3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
NPIPA1Q9UND3 AC009812.4-201ENST00000569134 1805 ntBASIC2.87□□□□□ -1.95
NPIPA1Q9UND3 RNU6-7-201ENST00000364784 107 ntBASIC2.87□□□□□ -1.95
NPIPA1Q9UND3 RNU6-8-201ENST00000365467 107 ntBASIC2.87□□□□□ -1.95
NPIPA1Q9UND3 RNU6-805P-201ENST00000365643 106 ntBASIC2.87□□□□□ -1.95
NPIPA1Q9UND3 RPS3AP26-201ENST00000398259 784 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms