Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 RNA5SP447-201ENST00000363749 119 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 SNORD3H-201ENST00000384486 214 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 RNU2-43P-201ENST00000410306 190 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 RNU2-29P-201ENST00000410423 189 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 AL161631.1-201ENST00000417933 486 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 RPS12P23-201ENST00000419579 400 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 RAC1P6-201ENST00000423911 575 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 AC004866.2-201ENST00000438285 481 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 AL162591.2-201ENST00000449634 317 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 RN7SL432P-201ENST00000484057 298 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 RPL36AP41-201ENST00000493820 306 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 RNU4-29P-201ENST00000515943 174 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 AC022690.1-201ENST00000526681 550 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 AC018630.1-201ENST00000541376 925 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 FKBP1BP1-201ENST00000553366 325 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 AC007424.1-203ENST00000554613 687 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 AC084783.1-201ENST00000565846 910 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 AC010680.3-201ENST00000604215 520 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 AC012443.1-201ENST00000605605 231 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 AC010338.1-201ENST00000621823 717 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 BDP1P-201ENST00000582658 1990 ntBASIC5.29□□□□□ -1.56
DDX41Q9UJV9 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
DDX41Q9UJV9 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.28□□□□□ -1.56
DDX41Q9UJV9 AP000542.2-201ENST00000623199 6179 ntBASIC5.28□□□□□ -1.56
DDX41Q9UJV9 AC004972.1-201ENST00000623934 2209 ntBASIC5.28□□□□□ -1.56
DDX41Q9UJV9 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 RNU6-845P-201ENST00000362578 103 ntBASIC5.28□□□□□ -1.56
DDX41Q9UJV9 Y_RNA.142-201ENST00000363491 102 ntBASIC5.28□□□□□ -1.56
DDX41Q9UJV9 MIR124-3-201ENST00000384866 87 ntBASIC5.28□□□□□ -1.56
DDX41Q9UJV9 AL583834.1-201ENST00000406943 343 ntBASIC5.28□□□□□ -1.56
DDX41Q9UJV9 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 AC068533.1-201ENST00000418542 415 ntBASIC5.28□□□□□ -1.56
DDX41Q9UJV9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 RPL23AP43-201ENST00000446445 471 ntBASIC5.28□□□□□ -1.56
DDX41Q9UJV9 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 SUB1P1-201ENST00000524415 382 ntBASIC5.28□□□□□ -1.56
DDX41Q9UJV9 DEFB109D-201ENST00000529497 240 ntBASIC5.28□□□□□ -1.56
DDX41Q9UJV9 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 AP001781.1-201ENST00000530977 207 ntBASIC5.28□□□□□ -1.56
DDX41Q9UJV9 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 AC093012.1-202ENST00000549403 582 ntBASIC5.28□□□□□ -1.56
DDX41Q9UJV9 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 AL121603.1-201ENST00000553815 142 ntBASIC5.28□□□□□ -1.56
DDX41Q9UJV9 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 AC069061.3-201ENST00000582254 823 ntBASIC5.28□□□□□ -1.56
DDX41Q9UJV9 HMGB2P1-201ENST00000591146 634 ntBASIC5.28□□□□□ -1.56
DDX41Q9UJV9 AL117336.2-201ENST00000602435 335 ntBASIC5.28□□□□□ -1.56
DDX41Q9UJV9 U3.53-201ENST00000628922 216 ntBASIC5.28□□□□□ -1.56
DDX41Q9UJV9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 ZNF137P-201ENST00000456718 1920 ntBASIC5.28□□□□□ -1.56
DDX41Q9UJV9 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 AC074029.4-201ENST00000624796 1859 ntBASIC5.28□□□□□ -1.56
DDX41Q9UJV9 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.28□□□□□ -1.56
DDX41Q9UJV9 ASNSP3-201ENST00000451989 1306 ntBASIC5.27□□□□□ -1.57
DDX41Q9UJV9 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
DDX41Q9UJV9 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
DDX41Q9UJV9 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
DDX41Q9UJV9 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
DDX41Q9UJV9 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.27□□□□□ -1.57
DDX41Q9UJV9 RNU6-332P-201ENST00000391193 108 ntBASIC5.27□□□□□ -1.57
DDX41Q9UJV9 ARL4AP5-201ENST00000404372 599 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms