Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AL451062.2-201ENST00000427515 271 ntBASIC6□□□□□ -1.45
LIMD1Q9UGP4 RN7SL51P-201ENST00000468230 285 ntBASIC6□□□□□ -1.45
LIMD1Q9UGP4 HMGN2P13-201ENST00000476476 274 ntBASIC6□□□□□ -1.45
LIMD1Q9UGP4 RPL23AP40-201ENST00000487630 390 ntBASIC6□□□□□ -1.45
LIMD1Q9UGP4 RPS24P16-201ENST00000497294 392 ntBASIC6□□□□□ -1.45
LIMD1Q9UGP4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC6□□□□□ -1.45
LIMD1Q9UGP4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC6□□□□□ -1.45
LIMD1Q9UGP4 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6□□□□□ -1.45
LIMD1Q9UGP4 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6□□□□□ -1.45
LIMD1Q9UGP4 AC009779.6-201ENST00000603972 165 ntBASIC6□□□□□ -1.45
LIMD1Q9UGP4 AC012603.1-201ENST00000606424 528 ntBASIC6□□□□□ -1.45
LIMD1Q9UGP4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6□□□□□ -1.45
LIMD1Q9UGP4 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6□□□□□ -1.45
LIMD1Q9UGP4 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LIMD1Q9UGP4 AP002512.4-202ENST00000641599 4530 ntBASIC6□□□□□ -1.45
LIMD1Q9UGP4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC6□□□□□ -1.45
LIMD1Q9UGP4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC6□□□□□ -1.45
LIMD1Q9UGP4 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6□□□□□ -1.45
LIMD1Q9UGP4 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
LIMD1Q9UGP4 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LIMD1Q9UGP4 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 RPL9P7-201ENST00000330965 580 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 AL159987.1-201ENST00000347911 293 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 MIR335-201ENST00000362173 94 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 RNA5SP131-201ENST00000365452 119 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 RN7SKP213-201ENST00000410746 298 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 HSPD1P21-201ENST00000436541 245 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 RPS12P17-201ENST00000438591 377 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 AL513043.1-201ENST00000439124 535 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 RANP8-201ENST00000444720 713 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 AC112187.1-201ENST00000455837 479 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 RPL9P9-202ENST00000466501 579 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 RPL7AP6-201ENST00000477943 801 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 RPS21P4-201ENST00000487122 248 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 HMGN1P11-201ENST00000508668 303 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 RN7SKP92-201ENST00000517266 244 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 AL158827.2-201ENST00000602494 330 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 AC068870.2-201ENST00000620635 389 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 AL691447.3-201ENST00000635020 330 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 Z99571.1-201ENST00000636677 394 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 AL049555.1-201ENST00000562834 1933 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 AL591135.1-201ENST00000401578 5914 ntBASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LIMD1Q9UGP4 AC100778.3-201ENST00000580060 1750 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 UBE2L2-201ENST00000254302 429 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 RNA5SP234-201ENST00000363916 119 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 RNU6-595P-201ENST00000363944 107 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 SNORA36C-201ENST00000384289 132 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 PPIAP9-201ENST00000403866 498 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 AL133482.1-201ENST00000415988 498 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 C4BPAP2-201ENST00000428434 478 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 CKS1BP5-201ENST00000434172 273 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 KNOP1P3-201ENST00000446933 426 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 ACA64.4-201ENST00000459070 127 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 AC110792.1-201ENST00000491826 472 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 Y_RNA.713-201ENST00000517013 96 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 SNORA81.3-201ENST00000517283 198 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 AL157871.3-201ENST00000557231 293 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 AC096996.1-201ENST00000563813 325 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 MRPS21P7-201ENST00000566937 238 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 AC005951.2-201ENST00000576282 495 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 MIR5696-201ENST00000578474 85 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 AC004852.3-201ENST00000614131 326 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 AC132068.1-201ENST00000623805 459 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 MTND5P9-201ENST00000503854 1755 ntBASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LIMD1Q9UGP4 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms