Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 RNU1-64P-201ENST00000365443 163 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 RNU6-754P-201ENST00000391166 107 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AL136372.1-201ENST00000403060 228 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 RNU2-37P-201ENST00000410695 177 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 RPS3AP3-201ENST00000411933 242 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 MTATP6P4-201ENST00000427725 675 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AL356535.1-201ENST00000440335 398 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AL022238.1-201ENST00000442557 355 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AL592447.1-201ENST00000447592 540 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 CFTRP1-201ENST00000456646 183 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 RNU7-59P-201ENST00000459101 61 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 RPL21P104-201ENST00000464143 478 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 MTND1P3-201ENST00000484956 952 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 RPL7P24-201ENST00000493052 752 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AC106872.2-201ENST00000494303 480 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 CBX3P3-201ENST00000508108 532 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 MTND4LP31-201ENST00000514859 294 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AC022447.1-201ENST00000515358 464 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 RNU6-352P-201ENST00000516908 107 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AP003467.2-201ENST00000520175 319 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 YPEL5P3-201ENST00000547227 352 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AC024909.2-201ENST00000553035 286 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AL133153.1-201ENST00000557756 303 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 HMGN1P30-201ENST00000589286 268 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AC064872.1-201ENST00000604823 1072 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AC131902.3-201ENST00000611767 581 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 MIR486-1-201ENST00000612171 68 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AC092140.2-201ENST00000618027 521 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 AC009812.4-201ENST00000569134 1805 ntBASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
HCN3Q9P1Z3 RNU5A-8P-201ENST00000364102 114 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 RNY4P16-201ENST00000364768 94 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 RNY4P34-201ENST00000364779 95 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 Y_RNA.359-201ENST00000365498 102 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 DEFB109C-201ENST00000382575 264 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 DEFB109B-201ENST00000382656 264 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 RNU6-213P-201ENST00000384051 104 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 RNU6-76P-201ENST00000384060 104 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 HSPE1P26-201ENST00000405341 275 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 PPP1R11P2-201ENST00000423543 382 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 TIMM9P1-201ENST00000436122 256 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 AL353706.1-201ENST00000436728 494 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 HMGB1P37-201ENST00000439613 609 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 RPL26P6-201ENST00000440913 438 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 AC108059.3-201ENST00000456388 214 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 RPL21P11-201ENST00000461458 483 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 RPS4XP13-201ENST00000483219 789 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 AC069499.1-201ENST00000489433 509 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 RN7SL323P-201ENST00000494712 295 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 RPL31P61-201ENST00000496160 376 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 RNA5SP143-201ENST00000516936 115 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 RNU6-840P-201ENST00000517275 65 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 AC087369.1-201ENST00000520775 996 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 CBX3P5-201ENST00000552017 521 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 MIR3146-201ENST00000580367 79 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 CKS1BP3-201ENST00000600888 237 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 KC877982.1-201ENST00000602313 470 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 AC128687.2-201ENST00000609657 566 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 AC093838.1-201ENST00000613014 469 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 AL603758.1-201ENST00000618654 241 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms