Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RNU6-878P-201ENST00000384578 110 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 MIR135A2-201ENST00000384854 100 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AL024507.1-201ENST00000412741 274 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AC087499.2-201ENST00000432861 149 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AL592447.1-201ENST00000447592 540 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AL358232.1-201ENST00000448030 501 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 RSL24D1P3-201ENST00000449255 495 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AC027673.1-201ENST00000456245 405 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AL672167.3-201ENST00000465951 960 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 RPL7P49-201ENST00000471402 708 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 KC877373.1-201ENST00000479066 408 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AC026427.2-201ENST00000506228 536 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AC025768.1-201ENST00000510057 267 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AL359273.1-201ENST00000510918 627 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 RPPH1-2P-201ENST00000516688 293 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 CKS1BP7-201ENST00000522230 235 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AC006518.2-201ENST00000542513 940 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 CR383656.7-201ENST00000548164 174 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 SETP7-201ENST00000552169 453 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 MIR5092-201ENST00000583139 88 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AC015688.2-201ENST00000584523 262 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AL049779.4-201ENST00000604500 156 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AC080188.3-201ENST00000624842 748 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AC026634.1-201ENST00000634369 198 ntBASIC2.45□□□□□ -2.02
VAPAQ9P0L0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.45□□□□□ -2.02
VAPAQ9P0L0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 RNU1-138P-201ENST00000384093 164 ntBASIC2.44□□□□□ -2.02
VAPAQ9P0L0 SNORA44-201ENST00000384584 132 ntBASIC2.44□□□□□ -2.02
VAPAQ9P0L0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.44□□□□□ -2.02
VAPAQ9P0L0 BX664727.1-201ENST00000416024 466 ntBASIC2.44□□□□□ -2.02
VAPAQ9P0L0 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 AC009296.1-201ENST00000443146 155 ntBASIC2.44□□□□□ -2.02
VAPAQ9P0L0 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 snoU13.28-201ENST00000459235 104 ntBASIC2.44□□□□□ -2.02
VAPAQ9P0L0 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 SNORA31.21-201ENST00000517180 77 ntBASIC2.44□□□□□ -2.02
VAPAQ9P0L0 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 MTCO1P47-201ENST00000523889 1271 ntBASIC2.44□□□□□ -2.02
VAPAQ9P0L0 AC022080.3-201ENST00000544433 482 ntBASIC2.44□□□□□ -2.02
VAPAQ9P0L0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 OR4K8P-201ENST00000578842 1048 ntBASIC2.44□□□□□ -2.02
VAPAQ9P0L0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 AC026741.1-201ENST00000605892 482 ntBASIC2.44□□□□□ -2.02
VAPAQ9P0L0 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 AC079597.1-201ENST00000624306 508 ntBASIC2.44□□□□□ -2.02
VAPAQ9P0L0 HPVC1-201ENST00000629899 1198 ntBASIC2.44□□□□□ -2.02
VAPAQ9P0L0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 AL163152.1-201ENST00000642001 374 ntBASIC2.44□□□□□ -2.02
VAPAQ9P0L0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 AC026241.1-201ENST00000517873 2142 ntBASIC2.44□□□□□ -2.02
VAPAQ9P0L0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VAPAQ9P0L0 TPTE2P4-201ENST00000258589 1605 ntBASIC2.43□□□□□ -2.02
VAPAQ9P0L0 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VAPAQ9P0L0 DEFB108F-201ENST00000344638 222 ntBASIC2.43□□□□□ -2.02
VAPAQ9P0L0 RNU6-549P-201ENST00000384433 107 ntBASIC2.43□□□□□ -2.02
VAPAQ9P0L0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
VAPAQ9P0L0 ANAPC10P1-201ENST00000395991 556 ntBASIC2.43□□□□□ -2.02
VAPAQ9P0L0 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.43□□□□□ -2.02
VAPAQ9P0L0 RPLP0P7-201ENST00000416050 667 ntBASIC2.43□□□□□ -2.02
VAPAQ9P0L0 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.43□□□□□ -2.02
VAPAQ9P0L0 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
VAPAQ9P0L0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.43□□□□□ -2.02
VAPAQ9P0L0 AC129850.1-201ENST00000436203 508 ntBASIC2.43□□□□□ -2.02
VAPAQ9P0L0 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.43□□□□□ -2.02
VAPAQ9P0L0 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.43□□□□□ -2.02
VAPAQ9P0L0 COX7A2P2-201ENST00000505291 250 ntBASIC2.43□□□□□ -2.02
VAPAQ9P0L0 RNU6-798P-201ENST00000516912 103 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms