Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 RPAP2P1-201ENST00000603626 1168 ntBASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 AC107294.1-201ENST00000609524 467 ntBASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 AC068722.2-201ENST00000618734 544 ntBASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 AC103798.2-201ENST00000624292 632 ntBASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 AC092608.2-201ENST00000624427 218 ntBASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
HOXC10Q9NYD6 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 RNU6-251P-201ENST00000363235 104 ntBASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 TMSB4XP8-201ENST00000402089 135 ntBASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 TMSB4XP6-201ENST00000415187 135 ntBASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 TMSB4XP1-201ENST00000424567 135 ntBASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 AC013262.1-201ENST00000426710 252 ntBASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 SETP11-201ENST00000473027 690 ntBASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 AC096751.1-202ENST00000502691 1067 ntBASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 AC112198.4-201ENST00000515450 351 ntBASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 MTND1P36-201ENST00000522384 936 ntBASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 ZNF861P-201ENST00000588126 639 ntBASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 U73023.1-201ENST00000603134 700 ntBASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 AC008277.2-201ENST00000605196 797 ntBASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 AC090116.1-201ENST00000615679 446 ntBASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 AC010338.1-201ENST00000621823 717 ntBASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 AC098679.5-201ENST00000624394 571 ntBASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 ZNF519P1-201ENST00000449011 1626 ntBASIC3.17□□□□□ -1.9
HOXC10Q9NYD6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 MIR26A1-201ENST00000362205 77 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 RNU5B-4P-201ENST00000363508 111 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 RNU6-173P-201ENST00000364215 104 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 SNORD116-23-201ENST00000384645 92 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 RNA5SP252-201ENST00000391131 119 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 AL139098.1-201ENST00000407291 389 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 TAF13P2-201ENST00000416876 286 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 AL035407.1-201ENST00000429211 571 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 AC234064.1-201ENST00000436312 247 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 EEF1B2P7-201ENST00000451177 676 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 AC016550.1-201ENST00000505348 785 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 ZNF971P-201ENST00000562068 1249 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 VN1R87P-201ENST00000596706 487 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 AC010620.2-201ENST00000600135 313 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 AP002802.2-201ENST00000605877 235 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 AC243829.7-201ENST00000633081 225 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 AC004972.1-201ENST00000623934 2209 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 ASNSP3-201ENST00000451989 1306 ntBASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXC10Q9NYD6 RNU6-115P-201ENST00000364310 107 ntBASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 RNU6-730P-201ENST00000383954 104 ntBASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 RNA5SP508-201ENST00000411327 119 ntBASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 AC092638.1-201ENST00000411966 1275 ntBASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 AC092634.2-201ENST00000428146 1010 ntBASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 MTCYBP15-201ENST00000433123 1127 ntBASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 AL513328.1-201ENST00000446460 224 ntBASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 AC093278.1-201ENST00000494700 600 ntBASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 AC118282.1-201ENST00000506408 765 ntBASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 AC048346.1-201ENST00000510247 144 ntBASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 RAC1P5-201ENST00000512182 576 ntBASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 RPPH1-2P-201ENST00000516688 293 ntBASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.15□□□□□ -1.91
HOXC10Q9NYD6 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms