Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
KLHL28Q9NXS3 AC138915.1-201ENST00000565427 1685 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 SNRPEP3-201ENST00000338402 276 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 ANKRD36P1-201ENST00000344424 659 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 DEFB108F-201ENST00000344638 222 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 RNU6-216P-201ENST00000363282 104 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 U3.26-201ENST00000391236 204 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 SNORA26.7-201ENST00000391288 122 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 SNRPEP2-201ENST00000397592 279 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AL138885.1-201ENST00000405921 675 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AL450338.1-201ENST00000407987 512 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 RN7SKP123-201ENST00000410732 291 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 SDCBPP3-201ENST00000419629 891 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 C1DP1-201ENST00000426049 402 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AC011242.1-201ENST00000433596 1158 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AC009969.1-201ENST00000438726 172 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AC016696.1-201ENST00000446949 318 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AC010099.1-201ENST00000455434 375 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 PNPLA4P1-201ENST00000458328 305 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AC104164.3-201ENST00000467363 1258 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 RPS15AP17-201ENST00000470598 390 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AC092902.1-201ENST00000486999 259 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 RN7SL20P-201ENST00000488827 297 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 DEFB108D-201ENST00000527787 222 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 HSPE1P20-201ENST00000538133 289 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AC022080.3-201ENST00000544433 482 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AC128657.1-201ENST00000549459 145 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 SETP2-201ENST00000553886 926 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AC011260.1-201ENST00000578420 472 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 MIR3609-201ENST00000582661 80 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AC019159.1-201ENST00000605094 187 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 RPL21P136-201ENST00000605378 396 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AP000254.1-201ENST00000609934 520 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AC005332.6-201ENST00000613178 446 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AL161629.2-201ENST00000615347 275 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AC018692.3-201ENST00000623929 123 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AC006386.2-201ENST00000624491 75 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 AC012005.1-201ENST00000624575 75 ntBASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
KLHL28Q9NXS3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 AL356131.1-201ENST00000405826 414 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 RNU2-43P-201ENST00000410306 190 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 AC007742.1-201ENST00000425789 329 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 AL590233.1-201ENST00000430017 456 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 ELOCP26-201ENST00000436067 329 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 AC092427.1-201ENST00000439177 601 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 RSL24D1P3-201ENST00000449255 495 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 AL353691.1-201ENST00000451332 387 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 OFD1P3Y-201ENST00000453312 783 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 AC092798.1-201ENST00000458542 409 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 VN1R104P-201ENST00000505115 1009 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 SEM1P1-201ENST00000506694 209 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 RNU6-467P-201ENST00000517027 110 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 NDUFS5P6-201ENST00000529136 295 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 DEFB130C-202ENST00000530001 230 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 AC092451.2-201ENST00000538746 658 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 HSPE1P3-201ENST00000559254 309 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 MIR3921-201ENST00000577308 85 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 MIR4637-201ENST00000582405 84 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 AC010620.2-201ENST00000600135 313 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 TUG1_1.1-201ENST00000610654 145 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 AC253576.2-201ENST00000618815 580 ntBASIC2.81□□□□□ -1.96
KLHL28Q9NXS3 AC110079.1-202ENST00000635213 138 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms