Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 AC083843.2-201ENST00000568248 6253 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 OR13C1P-202ENST00000641378 2919 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 MIR133A2-201ENST00000347538 102 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 MIR411-201ENST00000362239 96 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 RNU6-1266P-201ENST00000362794 105 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 RN7SKP160-201ENST00000363804 340 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 RNU6-263P-201ENST00000363811 107 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 RNU6-682P-201ENST00000363843 106 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 Y_RNA.199-201ENST00000364014 102 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 U3.29-201ENST00000391296 212 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 RNU6-493P-201ENST00000391321 108 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 EIF4EP2-201ENST00000422816 654 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 AC126120.1-201ENST00000431082 470 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 EZH2P1-201ENST00000431167 291 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 AL591704.1-201ENST00000432574 275 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 OR4C10P-201ENST00000434991 931 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 RPEP5-201ENST00000441137 268 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 DAP3P1-201ENST00000441522 278 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 AC108145.1-201ENST00000503770 153 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 SNORA70.11-201ENST00000515987 138 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 SNORA70.13-201ENST00000516116 138 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 AC022559.1-201ENST00000520905 205 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 AP000648.1-201ENST00000529682 397 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 OR10G5P-201ENST00000532733 358 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 AC126177.3-201ENST00000551839 688 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 AL590099.1-201ENST00000615276 138 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 RNA5SP439-201ENST00000617595 124 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 AL359955.1-201ENST00000455242 3275 ntBASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CUEDC1Q9NWM3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 AC116667.1-201ENST00000604855 2072 ntBASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 RNU1-76P-201ENST00000362903 159 ntBASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 Y_RNA.151-201ENST00000363566 112 ntBASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 MRPL53P1-201ENST00000414323 319 ntBASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 AL355433.1-201ENST00000422804 300 ntBASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 OR2AH1P-201ENST00000425717 928 ntBASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 AC092162.1-201ENST00000432828 434 ntBASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 AC053481.1-201ENST00000467217 306 ntBASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 AC098869.1-201ENST00000481627 292 ntBASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 AC100870.1-201ENST00000522035 505 ntBASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 DEFB108E-201ENST00000524692 240 ntBASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 AC009643.1-201ENST00000532030 391 ntBASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 AL133271.1-201ENST00000538229 291 ntBASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 COX6CP7-201ENST00000597056 208 ntBASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 AC006363.1-201ENST00000603806 463 ntBASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 AL589674.2-201ENST00000604304 337 ntBASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 AC021753.1-201ENST00000635724 168 ntBASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 AP004607.3-201ENST00000530354 3915 ntBASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 AC004158.1-201ENST00000564508 4319 ntBASIC5.62□□□□□ -1.51
CUEDC1Q9NWM3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CUEDC1Q9NWM3 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms