Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.28□□□□□ -2.04
CISHQ9NSE2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CISHQ9NSE2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CISHQ9NSE2 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CISHQ9NSE2 NACA3P-201ENST00000359690 648 ntBASIC2.27□□□□□ -2.05
CISHQ9NSE2 RNU6-1249P-201ENST00000363237 111 ntBASIC2.27□□□□□ -2.05
CISHQ9NSE2 RNA5SP126-201ENST00000365092 109 ntBASIC2.27□□□□□ -2.05
CISHQ9NSE2 SNORA1.3-201ENST00000384676 136 ntBASIC2.27□□□□□ -2.05
CISHQ9NSE2 AC005189.1-201ENST00000431286 310 ntBASIC2.27□□□□□ -2.05
CISHQ9NSE2 AL139415.2-201ENST00000431968 163 ntBASIC2.27□□□□□ -2.05
CISHQ9NSE2 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.27□□□□□ -2.05
CISHQ9NSE2 HSFY3P-201ENST00000444242 1191 ntBASIC2.27□□□□□ -2.05
CISHQ9NSE2 AL591719.1-201ENST00000444669 744 ntBASIC2.27□□□□□ -2.05
CISHQ9NSE2 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC2.27□□□□□ -2.05
CISHQ9NSE2 MTCO3P11-201ENST00000455103 774 ntBASIC2.27□□□□□ -2.05
CISHQ9NSE2 RPL9P6-201ENST00000492764 598 ntBASIC2.27□□□□□ -2.05
CISHQ9NSE2 AC096751.1-202ENST00000502691 1067 ntBASIC2.27□□□□□ -2.05
CISHQ9NSE2 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.27□□□□□ -2.05
CISHQ9NSE2 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.27□□□□□ -2.05
CISHQ9NSE2 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.27□□□□□ -2.05
CISHQ9NSE2 RPL23AP78-201ENST00000599928 470 ntBASIC2.27□□□□□ -2.05
CISHQ9NSE2 AP001330.4-201ENST00000604350 154 ntBASIC2.27□□□□□ -2.05
CISHQ9NSE2 STMN1P1-201ENST00000617809 440 ntBASIC2.27□□□□□ -2.05
CISHQ9NSE2 CU459211.1-201ENST00000635667 749 ntBASIC2.27□□□□□ -2.05
CISHQ9NSE2 AC068620.4-201ENST00000636730 1182 ntBASIC2.27□□□□□ -2.05
CISHQ9NSE2 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CISHQ9NSE2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.27□□□□□ -2.05
CISHQ9NSE2 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CISHQ9NSE2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.26□□□□□ -2.05
CISHQ9NSE2 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CISHQ9NSE2 RNU6-989P-201ENST00000362756 107 ntBASIC2.26□□□□□ -2.05
CISHQ9NSE2 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.26□□□□□ -2.05
CISHQ9NSE2 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CISHQ9NSE2 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CISHQ9NSE2 SNORA64-201ENST00000384674 134 ntBASIC2.26□□□□□ -2.05
CISHQ9NSE2 AL023284.1-201ENST00000403956 276 ntBASIC2.26□□□□□ -2.05
CISHQ9NSE2 RNU2-25P-201ENST00000411041 191 ntBASIC2.26□□□□□ -2.05
CISHQ9NSE2 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.26□□□□□ -2.05
CISHQ9NSE2 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CISHQ9NSE2 AL137014.1-201ENST00000420490 1226 ntBASIC2.26□□□□□ -2.05
CISHQ9NSE2 RPL7P37-201ENST00000425095 738 ntBASIC2.26□□□□□ -2.05
CISHQ9NSE2 FAM103A2P-201ENST00000444122 354 ntBASIC2.26□□□□□ -2.05
CISHQ9NSE2 AC096638.1-201ENST00000444678 216 ntBASIC2.26□□□□□ -2.05
CISHQ9NSE2 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.26□□□□□ -2.05
CISHQ9NSE2 AL353705.4-201ENST00000449661 238 ntBASIC2.26□□□□□ -2.05
CISHQ9NSE2 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.26□□□□□ -2.05
CISHQ9NSE2 ANXA2P1-201ENST00000505539 926 ntBASIC2.26□□□□□ -2.05
CISHQ9NSE2 MTCO1P31-201ENST00000506355 492 ntBASIC2.26□□□□□ -2.05
CISHQ9NSE2 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.26□□□□□ -2.05
CISHQ9NSE2 RNU6-760P-201ENST00000516078 97 ntBASIC2.26□□□□□ -2.05
CISHQ9NSE2 RN7SKP40-201ENST00000517211 242 ntBASIC2.26□□□□□ -2.05
CISHQ9NSE2 SNRPGP16-201ENST00000533275 226 ntBASIC2.26□□□□□ -2.05
CISHQ9NSE2 AC008739.2-201ENST00000597006 317 ntBASIC2.26□□□□□ -2.05
CISHQ9NSE2 SNHG22-203ENST00000617833 660 ntBASIC2.26□□□□□ -2.05
CISHQ9NSE2 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.26□□□□□ -2.05
CISHQ9NSE2 AC017104.5-201ENST00000637647 639 ntBASIC2.26□□□□□ -2.05
CISHQ9NSE2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.26□□□□□ -2.05
CISHQ9NSE2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CISHQ9NSE2 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
CISHQ9NSE2 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CISHQ9NSE2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CISHQ9NSE2 RNU6-1226P-201ENST00000384317 107 ntBASIC2.25□□□□□ -2.05
CISHQ9NSE2 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CISHQ9NSE2 AL139095.1-201ENST00000404326 391 ntBASIC2.25□□□□□ -2.05
CISHQ9NSE2 RN7SKP32-201ENST00000410167 303 ntBASIC2.25□□□□□ -2.05
CISHQ9NSE2 RNU2-17P-201ENST00000410290 190 ntBASIC2.25□□□□□ -2.05
CISHQ9NSE2 AC092447.6-201ENST00000414578 210 ntBASIC2.25□□□□□ -2.05
CISHQ9NSE2 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.25□□□□□ -2.05
CISHQ9NSE2 DPH3P2-201ENST00000422618 250 ntBASIC2.25□□□□□ -2.05
CISHQ9NSE2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CISHQ9NSE2 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CISHQ9NSE2 RPPH1-2P-201ENST00000516688 293 ntBASIC2.25□□□□□ -2.05
CISHQ9NSE2 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.25□□□□□ -2.05
CISHQ9NSE2 OR10V3P-201ENST00000525712 725 ntBASIC2.25□□□□□ -2.05
CISHQ9NSE2 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.25□□□□□ -2.05
CISHQ9NSE2 NOP56P3-201ENST00000549457 385 ntBASIC2.25□□□□□ -2.05
CISHQ9NSE2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.25□□□□□ -2.05
CISHQ9NSE2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.25□□□□□ -2.05
CISHQ9NSE2 AC010378.1-201ENST00000619270 362 ntBASIC2.25□□□□□ -2.05
CISHQ9NSE2 AL162233.1-201ENST00000620014 944 ntBASIC2.25□□□□□ -2.05
CISHQ9NSE2 AC103798.2-201ENST00000624292 632 ntBASIC2.25□□□□□ -2.05
CISHQ9NSE2 AC092608.3-201ENST00000625017 386 ntBASIC2.25□□□□□ -2.05
CISHQ9NSE2 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CISHQ9NSE2 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
CISHQ9NSE2 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CISHQ9NSE2 SNORA27.3-201ENST00000364937 134 ntBASIC2.24□□□□□ -2.05
CISHQ9NSE2 SNORA67.3-201ENST00000384366 140 ntBASIC2.24□□□□□ -2.05
CISHQ9NSE2 MIR627-201ENST00000384979 97 ntBASIC2.24□□□□□ -2.05
CISHQ9NSE2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.24□□□□□ -2.05
CISHQ9NSE2 AC092745.2-202ENST00000411880 369 ntBASIC2.24□□□□□ -2.05
CISHQ9NSE2 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.24□□□□□ -2.05
CISHQ9NSE2 HMGN2P35-201ENST00000412164 270 ntBASIC2.24□□□□□ -2.05
CISHQ9NSE2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.24□□□□□ -2.05
CISHQ9NSE2 AC114973.1-201ENST00000429057 632 ntBASIC2.24□□□□□ -2.05
CISHQ9NSE2 MTND2P21-201ENST00000436242 1042 ntBASIC2.24□□□□□ -2.05
CISHQ9NSE2 UBE2D3P1-201ENST00000436669 444 ntBASIC2.24□□□□□ -2.05
CISHQ9NSE2 SDR42E1P3-201ENST00000438345 502 ntBASIC2.24□□□□□ -2.05
CISHQ9NSE2 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.24□□□□□ -2.05
CISHQ9NSE2 AL109741.2-201ENST00000455561 343 ntBASIC2.24□□□□□ -2.05
CISHQ9NSE2 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms