Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.92□□□□□ -1.78
DDX4Q9NQI0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
DDX4Q9NQI0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
DDX4Q9NQI0 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
DDX4Q9NQI0 AL031679.1-201ENST00000400616 525 ntBASIC3.92□□□□□ -1.78
DDX4Q9NQI0 RN7SKP266-201ENST00000410232 287 ntBASIC3.92□□□□□ -1.78
DDX4Q9NQI0 HMGB1P11-201ENST00000413899 637 ntBASIC3.92□□□□□ -1.78
DDX4Q9NQI0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.92□□□□□ -1.78
DDX4Q9NQI0 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.92□□□□□ -1.78
DDX4Q9NQI0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.92□□□□□ -1.78
DDX4Q9NQI0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.92□□□□□ -1.78
DDX4Q9NQI0 AC006028.1-201ENST00000438379 402 ntBASIC3.92□□□□□ -1.78
DDX4Q9NQI0 HSPE1P28-201ENST00000443139 211 ntBASIC3.92□□□□□ -1.78
DDX4Q9NQI0 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.92□□□□□ -1.78
DDX4Q9NQI0 ZNF114P1-201ENST00000453500 292 ntBASIC3.92□□□□□ -1.78
DDX4Q9NQI0 AC078785.3-201ENST00000476607 425 ntBASIC3.92□□□□□ -1.78
DDX4Q9NQI0 AC116337.2-201ENST00000477662 156 ntBASIC3.92□□□□□ -1.78
DDX4Q9NQI0 POU5F1P7-201ENST00000508759 541 ntBASIC3.92□□□□□ -1.78
DDX4Q9NQI0 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.92□□□□□ -1.78
DDX4Q9NQI0 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.92□□□□□ -1.78
DDX4Q9NQI0 HIGD1AP3-201ENST00000515857 278 ntBASIC3.92□□□□□ -1.78
DDX4Q9NQI0 SNORA70.19-201ENST00000516717 90 ntBASIC3.92□□□□□ -1.78
DDX4Q9NQI0 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.92□□□□□ -1.78
DDX4Q9NQI0 COX6CP8-201ENST00000522620 226 ntBASIC3.92□□□□□ -1.78
DDX4Q9NQI0 AL022161.1-201ENST00000604390 213 ntBASIC3.92□□□□□ -1.78
DDX4Q9NQI0 AL137843.1-201ENST00000605078 385 ntBASIC3.92□□□□□ -1.78
DDX4Q9NQI0 AC138932.5-201ENST00000617759 563 ntBASIC3.92□□□□□ -1.78
DDX4Q9NQI0 AC103858.2-201ENST00000621471 543 ntBASIC3.92□□□□□ -1.78
DDX4Q9NQI0 AL445264.1-201ENST00000621719 171 ntBASIC3.92□□□□□ -1.78
DDX4Q9NQI0 AL356266.1-201ENST00000623311 483 ntBASIC3.92□□□□□ -1.78
DDX4Q9NQI0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
DDX4Q9NQI0 MTCO1P24-201ENST00000515438 1558 ntBASIC3.92□□□□□ -1.78
DDX4Q9NQI0 NUP58P1-201ENST00000502546 1738 ntBASIC3.92□□□□□ -1.78
DDX4Q9NQI0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
DDX4Q9NQI0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.92□□□□□ -1.78
DDX4Q9NQI0 AC007256.1-201ENST00000392253 2765 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.91□□□□□ -1.78
DDX4Q9NQI0 RNU6-600P-201ENST00000362524 99 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 MIR320C1-201ENST00000408566 88 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 MTATP6P27-201ENST00000416987 621 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 GLRXP1-201ENST00000423261 334 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AL353705.1-201ENST00000433468 480 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 MUPP-201ENST00000438111 566 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AL512286.1-201ENST00000439244 400 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 COX6CP2-201ENST00000444980 225 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.91□□□□□ -1.78
DDX4Q9NQI0 KATNBL1P6-201ENST00000453433 915 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 S100A11P2-201ENST00000467589 312 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AC104563.1-201ENST00000476147 376 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AL024509.2-201ENST00000493462 493 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AC080014.1-201ENST00000496877 1201 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.91□□□□□ -1.78
DDX4Q9NQI0 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.91□□□□□ -1.78
DDX4Q9NQI0 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.91□□□□□ -1.78
DDX4Q9NQI0 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.91□□□□□ -1.78
DDX4Q9NQI0 RNA5SP341-201ENST00000516261 117 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 RNU1-103P-201ENST00000516502 125 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 RN7SKP116-201ENST00000516902 319 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AP000889.1-201ENST00000530968 660 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.91□□□□□ -1.78
DDX4Q9NQI0 HIGD1AP1-201ENST00000550979 275 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AC141257.3-201ENST00000572906 215 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 MIR4738-201ENST00000579134 87 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AC004223.2-201ENST00000590309 544 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AC090186.1-201ENST00000605991 572 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AC084782.3-201ENST00000612282 578 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AC073968.1-201ENST00000618594 637 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AL356321.1-201ENST00000621360 228 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AC004009.2-201ENST00000623016 728 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.91□□□□□ -1.78
DDX4Q9NQI0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.91□□□□□ -1.78
DDX4Q9NQI0 AC092192.1-201ENST00000633154 1018 ntBASIC3.91□□□□□ -1.78
DDX4Q9NQI0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.91□□□□□ -1.78
DDX4Q9NQI0 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.91□□□□□ -1.78
DDX4Q9NQI0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
DDX4Q9NQI0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.91□□□□□ -1.78
DDX4Q9NQI0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
DDX4Q9NQI0 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
DDX4Q9NQI0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
DDX4Q9NQI0 AL022578.1-201ENST00000439330 1433 ntBASIC3.9□□□□□ -1.78
DDX4Q9NQI0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 RPL31P1-201ENST00000398116 372 ntBASIC3.9□□□□□ -1.79
DDX4Q9NQI0 HSPE1P26-201ENST00000405341 275 ntBASIC3.9□□□□□ -1.79
DDX4Q9NQI0 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 RNU4-47P-201ENST00000410876 114 ntBASIC3.9□□□□□ -1.79
DDX4Q9NQI0 EI24P1-201ENST00000416584 867 ntBASIC3.9□□□□□ -1.79
DDX4Q9NQI0 AL159169.1-201ENST00000421119 127 ntBASIC3.9□□□□□ -1.79
DDX4Q9NQI0 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 MTND5P14-201ENST00000441481 1267 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms