Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSU72Q9NP77 HSPA8P4-201ENST00000511877 1920 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.97□□□□□ -1.61
SSU72Q9NP77 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSU72Q9NP77 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSU72Q9NP77 SCARNA15-201ENST00000607520 4325 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSU72Q9NP77 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSU72Q9NP77 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.97□□□□□ -1.61
SSU72Q9NP77 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.97□□□□□ -1.61
SSU72Q9NP77 AC116667.1-201ENST00000604855 2072 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 AC104118.1-201ENST00000607625 1589 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 RNU6-989P-201ENST00000362756 107 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 Y_RNA.307-201ENST00000365022 117 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 RNU6-715P-201ENST00000365204 103 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 RNU1-115P-201ENST00000365329 160 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSU72Q9NP77 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSU72Q9NP77 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.97□□□□□ -1.61
SSU72Q9NP77 DEFB109C-201ENST00000382575 264 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 DEFB109B-201ENST00000382656 264 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.97□□□□□ -1.61
SSU72Q9NP77 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.97□□□□□ -1.61
SSU72Q9NP77 RPL23AP69-201ENST00000431134 458 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 BX323845.1-201ENST00000432417 179 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.97□□□□□ -1.61
SSU72Q9NP77 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.97□□□□□ -1.61
SSU72Q9NP77 AC010631.1-201ENST00000474150 156 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 AC005798.1-201ENST00000513715 387 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 SCARNA16.2-201ENST00000516520 172 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 Y_RNA.721-201ENST00000517207 102 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 AP005902.1-201ENST00000521358 186 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 AC012339.2-201ENST00000523996 453 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.97□□□□□ -1.61
SSU72Q9NP77 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.97□□□□□ -1.61
SSU72Q9NP77 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.97□□□□□ -1.61
SSU72Q9NP77 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.97□□□□□ -1.61
SSU72Q9NP77 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.97□□□□□ -1.61
SSU72Q9NP77 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSU72Q9NP77 AC011494.1-201ENST00000596454 237 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 AL138889.2-201ENST00000603883 242 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 SNORD58B-201ENST00000607313 66 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 AC015982.1-201ENST00000608113 465 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 AC006329.2-201ENST00000611491 394 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 TUG1_2.1-201ENST00000614234 87 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 AC140113.4-201ENST00000622087 222 ntBASIC4.97□□□□□ -1.61
SSU72Q9NP77 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.97□□□□□ -1.61
SSU72Q9NP77 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSU72Q9NP77 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSU72Q9NP77 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSU72Q9NP77 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
SSU72Q9NP77 MAPK10-320ENST00000641462 6696 ntBASIC4.96□□□□□ -1.61
SSU72Q9NP77 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.96□□□□□ -1.61
SSU72Q9NP77 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.96□□□□□ -1.61
SSU72Q9NP77 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.96□□□□□ -1.62
SSU72Q9NP77 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SSU72Q9NP77 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SSU72Q9NP77 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSU72Q9NP77 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
SSU72Q9NP77 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSU72Q9NP77 RNU6-450P-201ENST00000364654 107 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 RNU6-701P-201ENST00000384059 107 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 U3.25-201ENST00000391209 220 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 RPS23P10-201ENST00000416185 486 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.96□□□□□ -1.62
SSU72Q9NP77 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.96□□□□□ -1.62
SSU72Q9NP77 USP9YP30-201ENST00000430729 455 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 AL591212.2-201ENST00000433923 257 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 NOTCH2P1-201ENST00000443481 624 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 GEMIN8P3-201ENST00000445417 720 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.96□□□□□ -1.62
SSU72Q9NP77 snoU109.4-201ENST00000458953 143 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 AC022795.1-201ENST00000473808 480 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 DEFB109F-201ENST00000491870 277 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 AC022493.2-201ENST00000506122 481 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.96□□□□□ -1.62
SSU72Q9NP77 RNU4-77P-201ENST00000516692 156 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 RN7SKP183-201ENST00000517169 324 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 RNU1-54P-201ENST00000517181 120 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSU72Q9NP77 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.96□□□□□ -1.62
SSU72Q9NP77 AC092447.9-201ENST00000603395 144 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 AL670379.6-201ENST00000603753 252 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 AL670379.1-201ENST00000604752 252 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 AL670379.5-201ENST00000605253 252 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 AL670379.8-201ENST00000605353 252 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 AL670379.7-201ENST00000605823 252 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 AL121612.2-201ENST00000612261 482 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 HMGB1P24-202ENST00000615653 685 ntBASIC4.96□□□□□ -1.62
SSU72Q9NP77 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSU72Q9NP77 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SSU72Q9NP77 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
SSU72Q9NP77 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSU72Q9NP77 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.96□□□□□ -1.62
SSU72Q9NP77 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SSU72Q9NP77 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSU72Q9NP77 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms