Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 COX7A2P2-201ENST00000505291 250 ntBASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 HMGB1P14-201ENST00000557424 591 ntBASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 AL157394.1-201ENST00000562983 1224 ntBASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 TUG1_1.1-201ENST00000610654 145 ntBASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 CYCSP41-201ENST00000616920 296 ntBASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 AC068880.5-201ENST00000624331 290 ntBASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 AP000720.1-201ENST00000625091 483 ntBASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.03□□□□□ -1.92
TM9SF3Q9HD45 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.93
TM9SF3Q9HD45 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 RNU5B-1-201ENST00000363286 116 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 RNU6-468P-201ENST00000384003 109 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 RPL21P75-201ENST00000396599 483 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 RPL21P28-201ENST00000401418 483 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AL592114.1-201ENST00000403842 483 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 RNU6-575P-201ENST00000411326 105 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AC245054.2-201ENST00000415639 319 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AL513477.1-202ENST00000417061 214 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 RPL7L1P10-201ENST00000427790 463 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 RPL23AP74-201ENST00000437246 471 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 RPL21P2-201ENST00000440049 481 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 RPL21P39-201ENST00000463605 483 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AC011979.1-201ENST00000472300 483 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 RPL31P60-201ENST00000478450 367 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 RPL21P93-201ENST00000480465 489 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AC233702.1-201ENST00000482905 502 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AC087190.1-201ENST00000484462 480 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AC093591.1-201ENST00000491435 481 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 RPL21P16-201ENST00000495531 483 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AC091826.1-201ENST00000514065 313 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 RNA5SP356-201ENST00000515972 94 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 OR5AK1P-201ENST00000524837 922 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AP003066.2-201ENST00000529375 555 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AC007536.1-201ENST00000533382 349 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 CYB5AP5-201ENST00000549779 389 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 GTF3AP2-201ENST00000557014 266 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AC090079.2-201ENST00000575289 768 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 MIR4666A-201ENST00000580160 79 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AL035411.2-201ENST00000604022 421 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 OR2AS2P-201ENST00000606902 342 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AC004696.1-201ENST00000614345 607 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AC011330.2-201ENST00000621680 635 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AC084035.1-201ENST00000634543 607 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AC110079.1-202ENST00000635213 138 ntBASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TM9SF3Q9HD45 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 GABRG2-229ENST00000641017 3628 ntBASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 ZNF519P1-201ENST00000449011 1626 ntBASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 AC009812.4-201ENST00000569134 1805 ntBASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 U8.9-201ENST00000365667 134 ntBASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 MIR887-201ENST00000401258 79 ntBASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 FO393413.1-201ENST00000402892 195 ntBASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 RNU2-43P-201ENST00000410306 190 ntBASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 RNU2-47P-201ENST00000410649 186 ntBASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 RAC1P8-201ENST00000427086 527 ntBASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 MTCYBP15-201ENST00000433123 1127 ntBASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 PNPLA4P1-201ENST00000458328 305 ntBASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 RPL30P5-201ENST00000494923 336 ntBASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 AC125611.2-201ENST00000551907 647 ntBASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 BNIP3P24-201ENST00000593398 557 ntBASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 AC008739.2-201ENST00000597006 317 ntBASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 AC010620.2-201ENST00000600135 313 ntBASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 DUXAP10-204ENST00000612052 616 ntBASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 LRRC77P-213ENST00000637727 880 ntBASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
TM9SF3Q9HD45 AC026241.1-201ENST00000517873 2142 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms