Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 MIR3118-1-201ENST00000581787 76 ntBASIC4.09□□□□□ -1.75
USP29Q9HBJ7 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 NRBF2P1-201ENST00000587407 859 ntBASIC4.09□□□□□ -1.75
USP29Q9HBJ7 AP000860.1-201ENST00000605250 559 ntBASIC4.09□□□□□ -1.75
USP29Q9HBJ7 BX664608.1-201ENST00000610519 487 ntBASIC4.09□□□□□ -1.75
USP29Q9HBJ7 AC073534.2-201ENST00000620377 381 ntBASIC4.09□□□□□ -1.75
USP29Q9HBJ7 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
USP29Q9HBJ7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.09□□□□□ -1.76
USP29Q9HBJ7 BDP1P-201ENST00000582658 1990 ntBASIC4.09□□□□□ -1.76
USP29Q9HBJ7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
USP29Q9HBJ7 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.09□□□□□ -1.76
USP29Q9HBJ7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 IPO8P1-201ENST00000455509 3109 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 OR5J1P-201ENST00000313544 939 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 RNU4-1-201ENST00000363925 141 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 RNA5SP399-201ENST00000364003 117 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 CYCSP19-201ENST00000411715 316 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 MTND3P17-201ENST00000416968 344 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 PIGFP2-201ENST00000421400 651 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AL139415.2-201ENST00000431968 163 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 HMGB1P37-201ENST00000439613 609 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AL356535.1-201ENST00000440335 398 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AL590399.6-201ENST00000446396 307 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 NDUFS5P3-201ENST00000450668 321 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AC104308.1-201ENST00000454621 333 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 snoU13.8-201ENST00000458890 104 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 RPL7P15-201ENST00000461190 712 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 RN7SL542P-201ENST00000467147 294 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 RBM43P1-201ENST00000476891 1081 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 PTGES3P3-201ENST00000511479 482 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 FTH1P21-201ENST00000512179 511 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 RNU6-718P-201ENST00000516166 105 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 RNA5SP143-201ENST00000516936 115 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 YPEL5P3-201ENST00000547227 352 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AC004853.1-201ENST00000604902 698 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 MIR486-1-201ENST00000612171 68 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AL732618.1-201ENST00000623251 301 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AC079597.1-201ENST00000624306 508 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AC091925.2-201ENST00000625059 256 ntBASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USP29Q9HBJ7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AC008725.1-201ENST00000605123 2263 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 PNPT1P2-201ENST00000456768 2050 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 ELF2P3-201ENST00000445099 1506 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 MIR423-201ENST00000362201 94 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 RNVU1-3-201ENST00000364313 161 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 Y_RNA.296-201ENST00000364930 108 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 RNU6-1103P-201ENST00000384150 107 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 PTMAP2-201ENST00000397627 327 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 CALM2P3-201ENST00000400429 449 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 MTND4LP11-201ENST00000422184 280 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AL451062.2-201ENST00000427515 271 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AL596276.1-201ENST00000434465 418 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 TBCAP1-201ENST00000436520 327 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AL451074.3-201ENST00000437709 472 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AC108734.1-201ENST00000439549 399 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 MTATP6P23-201ENST00000440153 476 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 VN1R34P-201ENST00000447387 883 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms