Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 RNU7-125P-201ENST00000458760 62 ntBASIC4.01□□□□□ -1.77
USP44Q9H0E7 AC072039.1-201ENST00000477611 581 ntBASIC4.01□□□□□ -1.77
USP44Q9H0E7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.01□□□□□ -1.77
USP44Q9H0E7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.01□□□□□ -1.77
USP44Q9H0E7 MTCYBP43-201ENST00000513621 740 ntBASIC4.01□□□□□ -1.77
USP44Q9H0E7 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.01□□□□□ -1.77
USP44Q9H0E7 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.01□□□□□ -1.77
USP44Q9H0E7 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.01□□□□□ -1.77
USP44Q9H0E7 MTCYBP41-201ENST00000528913 1123 ntBASIC4.01□□□□□ -1.77
USP44Q9H0E7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
USP44Q9H0E7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.01□□□□□ -1.77
USP44Q9H0E7 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
USP44Q9H0E7 SETP2-201ENST00000553886 926 ntBASIC4.01□□□□□ -1.77
USP44Q9H0E7 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.01□□□□□ -1.77
USP44Q9H0E7 MIR3200-201ENST00000580767 85 ntBASIC4.01□□□□□ -1.77
USP44Q9H0E7 AC122133.1-201ENST00000613964 233 ntBASIC4.01□□□□□ -1.77
USP44Q9H0E7 AC138932.5-201ENST00000617759 563 ntBASIC4.01□□□□□ -1.77
USP44Q9H0E7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.01□□□□□ -1.77
USP44Q9H0E7 AL355596.1-201ENST00000565399 3996 ntBASIC4.01□□□□□ -1.77
USP44Q9H0E7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
USP44Q9H0E7 AP001486.2-201ENST00000561652 5113 ntBASIC4.01□□□□□ -1.77
USP44Q9H0E7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
USP44Q9H0E7 AP001350.1-201ENST00000601906 1524 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4□□□□□ -1.77
USP44Q9H0E7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4□□□□□ -1.77
USP44Q9H0E7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4□□□□□ -1.77
USP44Q9H0E7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP44Q9H0E7 RNU6-500P-201ENST00000362349 107 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 RNA5SP374-201ENST00000362939 125 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 AL138878.1-201ENST00000405131 347 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4□□□□□ -1.77
USP44Q9H0E7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4□□□□□ -1.77
USP44Q9H0E7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4□□□□□ -1.77
USP44Q9H0E7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4□□□□□ -1.77
USP44Q9H0E7 Z99127.3-201ENST00000448158 395 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 snoU13.24-201ENST00000458998 104 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 RN7SL863P-201ENST00000462370 296 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 AC004801.2-202ENST00000463559 283 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 BZW1P2-201ENST00000473537 826 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 BET1P1-201ENST00000482276 359 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 AC023424.2-201ENST00000493479 777 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 AC034222.1-201ENST00000494052 532 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 AC106872.2-201ENST00000494303 480 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4□□□□□ -1.77
USP44Q9H0E7 AC118465.1-201ENST00000513820 1271 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 RNU6-232P-201ENST00000517144 64 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4□□□□□ -1.77
USP44Q9H0E7 AC103783.1-201ENST00000520506 373 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4□□□□□ -1.77
USP44Q9H0E7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4□□□□□ -1.77
USP44Q9H0E7 AC109635.4-202ENST00000531666 412 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4□□□□□ -1.77
USP44Q9H0E7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4□□□□□ -1.77
USP44Q9H0E7 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4□□□□□ -1.77
USP44Q9H0E7 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4□□□□□ -1.77
USP44Q9H0E7 AL031176.1-201ENST00000604554 466 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 AL590282.1-201ENST00000610379 1136 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 AL592295.2-201ENST00000612578 206 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 uc_338.25-201ENST00000613756 156 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 AC018755.4-201ENST00000619715 454 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4□□□□□ -1.77
USP44Q9H0E7 AC073476.4-201ENST00000628409 72 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 PCMTD1P7-201ENST00000634506 357 ntBASIC4□□□□□ -1.77
USP44Q9H0E7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP44Q9H0E7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4□□□□□ -1.77
USP44Q9H0E7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
USP44Q9H0E7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP44Q9H0E7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.99□□□□□ -1.77
USP44Q9H0E7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
USP44Q9H0E7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
USP44Q9H0E7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
USP44Q9H0E7 SNORA38.1-201ENST00000364172 131 ntBASIC3.99□□□□□ -1.77
USP44Q9H0E7 RPS3AP26-201ENST00000398259 784 ntBASIC3.99□□□□□ -1.77
USP44Q9H0E7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.99□□□□□ -1.77
USP44Q9H0E7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.99□□□□□ -1.77
USP44Q9H0E7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.99□□□□□ -1.77
USP44Q9H0E7 BX890604.2-201ENST00000427883 474 ntBASIC3.99□□□□□ -1.77
USP44Q9H0E7 AC006028.1-201ENST00000438379 402 ntBASIC3.99□□□□□ -1.77
USP44Q9H0E7 AL445567.1-201ENST00000439121 144 ntBASIC3.99□□□□□ -1.77
USP44Q9H0E7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
USP44Q9H0E7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.99□□□□□ -1.77
USP44Q9H0E7 NPM1P49-201ENST00000448027 714 ntBASIC3.99□□□□□ -1.77
USP44Q9H0E7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.99□□□□□ -1.77
USP44Q9H0E7 Z82190.1-201ENST00000454534 490 ntBASIC3.99□□□□□ -1.77
USP44Q9H0E7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
USP44Q9H0E7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.99□□□□□ -1.77
USP44Q9H0E7 AC104027.1-201ENST00000521887 300 ntBASIC3.99□□□□□ -1.77
USP44Q9H0E7 AC087373.1-201ENST00000524920 491 ntBASIC3.99□□□□□ -1.77
USP44Q9H0E7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
USP44Q9H0E7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.99□□□□□ -1.77
USP44Q9H0E7 CR383656.7-201ENST00000548164 174 ntBASIC3.99□□□□□ -1.77
USP44Q9H0E7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.99□□□□□ -1.77
USP44Q9H0E7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.99□□□□□ -1.77
USP44Q9H0E7 AC090888.1-201ENST00000561335 1141 ntBASIC3.99□□□□□ -1.77
USP44Q9H0E7 AC109446.2-201ENST00000567872 497 ntBASIC3.99□□□□□ -1.77
USP44Q9H0E7 AC135628.1-201ENST00000568867 534 ntBASIC3.99□□□□□ -1.77
USP44Q9H0E7 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms