Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC011712.1-201ENST00000588959 234 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 DPPA3P3-201ENST00000603842 430 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC140113.4-201ENST00000622087 222 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC007998.5-201ENST00000622938 237 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC099654.5-201ENST00000636479 350 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AP001350.1-201ENST00000601906 1524 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 RNU1-94P-201ENST00000362627 173 ntBASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 RNU6-1287P-201ENST00000362914 107 ntBASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 RNU6-797P-201ENST00000363101 109 ntBASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 Y_RNA.231-201ENST00000364358 102 ntBASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 SNORA7.2-201ENST00000364446 145 ntBASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 RNU6-1060P-201ENST00000384664 107 ntBASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 AC016397.1-201ENST00000412463 242 ntBASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 OR6C66P-201ENST00000414917 930 ntBASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 COX6B1P1-201ENST00000415962 213 ntBASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 AC068533.1-201ENST00000418542 415 ntBASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 OR2AM1P-201ENST00000422137 422 ntBASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 BX323845.1-201ENST00000432417 179 ntBASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 AC004938.1-201ENST00000438468 308 ntBASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 RPL7AP28-201ENST00000464513 571 ntBASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 RN7SL558P-201ENST00000497468 299 ntBASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 AC078918.1-201ENST00000498515 228 ntBASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 RN7SKP258-201ENST00000517151 304 ntBASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 Y_RNA.719-201ENST00000517156 106 ntBASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 MIR4691-201ENST00000583764 85 ntBASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 BDH2P1-201ENST00000602288 736 ntBASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
TRIM55Q9BYV6 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 NOL8P1-201ENST00000508336 3529 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 RNU5A-1-201ENST00000362698 116 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 RN7SKP95-201ENST00000362860 303 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 SNORA70.10-201ENST00000384515 134 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 MIR195-201ENST00000385194 87 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 Z97832.1-201ENST00000402490 328 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 AL162578.1-201ENST00000406202 378 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 SNRPFP3-201ENST00000457792 225 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 RNU7-180P-201ENST00000459240 63 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 HMGN2P26-201ENST00000463169 339 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 AC117522.3-201ENST00000507974 584 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 RBBP4P6-201ENST00000508098 202 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 RNU6-352P-201ENST00000516908 107 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 ATP5J2P6-201ENST00000565203 266 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 FGF7P1-201ENST00000582820 288 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 MIR4424-201ENST00000585257 86 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 AC008521.1-201ENST00000587471 187 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 AC011487.3-201ENST00000593607 453 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 AL627230.1-201ENST00000613077 211 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 AL591926.8-201ENST00000616876 211 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 AL359314.1-201ENST00000616913 261 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 AC005086.4-201ENST00000623065 213 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 AC090617.10-201ENST00000624308 134 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 PRO1804-201ENST00000623780 2050 ntBASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM55Q9BYV6 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms