Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC104850.1-201ENST00000435940 476 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC093156.1-201ENST00000440382 670 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC007677.1-201ENST00000445757 515 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 MTCO2P29-201ENST00000465212 189 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 RPS29P25-201ENST00000481709 171 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 RPL7P23-201ENST00000493874 747 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC018710.1-201ENST00000506509 158 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC117522.3-201ENST00000507974 584 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC105914.1-201ENST00000511798 226 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 LRRC34P2-201ENST00000514850 553 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 Y_RNA.704-201ENST00000516851 102 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AL121603.1-201ENST00000553815 142 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC104984.5-201ENST00000586878 94 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC005255.1-201ENST00000593748 216 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AL161734.1-201ENST00000609720 557 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AL355472.4-201ENST00000610233 626 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AC010632.3-201ENST00000611377 369 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 MIR7975-201ENST00000619350 68 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AL133243.3-201ENST00000617415 3004 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AP001642.1-201ENST00000624727 2117 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 AL391684.1-202ENST00000641293 1636 ntBASIC4.43□□□□□ -1.7
LRFN3Q9BTN0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 RNU6-223P-201ENST00000362830 107 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 RNU4-73P-201ENST00000363164 141 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 MIR3065-201ENST00000390137 79 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 AL583834.1-201ENST00000406943 343 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 MIR1289-1-201ENST00000408836 144 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 SNORA57.3-201ENST00000411095 141 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 USP9YP27-201ENST00000418455 438 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 AL589872.1-201ENST00000426602 288 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 AC008850.1-201ENST00000427546 362 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 RAC1P7-201ENST00000445367 377 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 AC010655.1-201ENST00000449336 292 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 PMCHL2-203ENST00000457791 237 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 RPS26P28-201ENST00000470806 348 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 HMGB1P29-201ENST00000505659 499 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 Y_RNA.701-201ENST00000516812 110 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 RN7SKP57-201ENST00000517248 293 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 IGKV2D-19-201ENST00000523346 262 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 MTND1P35-201ENST00000526739 508 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 MIR3146-201ENST00000580367 79 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 AC107294.1-201ENST00000609524 467 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 MIR6130-201ENST00000619419 109 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 AC140113.4-201ENST00000622087 222 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 AC083843.3-201ENST00000623679 2186 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 AC011755.1-201ENST00000623763 2049 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 AL159972.1-201ENST00000625150 448 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 MIR4275-201ENST00000636486 87 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 MIR1321-201ENST00000637766 79 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 AC112487.2-201ENST00000637950 304 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 AP000542.2-201ENST00000623199 6179 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 THAP12P5-201ENST00000405864 2275 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 AL138713.1-201ENST00000624026 2130 ntBASIC4.42□□□□□ -1.7
LRFN3Q9BTN0 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms