Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC009033.1-201ENST00000624279 431 ntBASIC4.14□□□□□ -1.75
VRK1Q99986 AP005264.7-201ENST00000625003 745 ntBASIC4.14□□□□□ -1.75
VRK1Q99986 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.14□□□□□ -1.75
VRK1Q99986 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.14□□□□□ -1.75
VRK1Q99986 AC139769.1-204ENST00000472297 1931 ntBASIC4.14□□□□□ -1.75
VRK1Q99986 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
VRK1Q99986 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VRK1Q99986 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
VRK1Q99986 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VRK1Q99986 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
VRK1Q99986 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VRK1Q99986 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
VRK1Q99986 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VRK1Q99986 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VRK1Q99986 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VRK1Q99986 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
VRK1Q99986 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VRK1Q99986 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VRK1Q99986 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 AL139276.1-201ENST00000311910 1001 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 RNA5SP235-201ENST00000365411 114 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VRK1Q99986 RNU6-398P-201ENST00000384143 109 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 AL136116.1-201ENST00000403591 381 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 RAP1BP3-201ENST00000407180 549 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 RNU6-373P-201ENST00000411247 98 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 EI24P1-201ENST00000416584 867 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.13□□□□□ -1.75
VRK1Q99986 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.13□□□□□ -1.75
VRK1Q99986 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.13□□□□□ -1.75
VRK1Q99986 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.13□□□□□ -1.75
VRK1Q99986 AC073415.1-201ENST00000449240 153 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 RN7SL354P-201ENST00000469282 294 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VRK1Q99986 RN7SL459P-201ENST00000481078 302 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.13□□□□□ -1.75
VRK1Q99986 HMGB1P22-201ENST00000505315 124 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 AC018710.1-201ENST00000506509 158 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.13□□□□□ -1.75
VRK1Q99986 SNORA31.20-201ENST00000517111 133 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 SNORA31.22-201ENST00000517204 135 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.13□□□□□ -1.75
VRK1Q99986 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.13□□□□□ -1.75
VRK1Q99986 AL049839.1-201ENST00000556151 657 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.13□□□□□ -1.75
VRK1Q99986 SNORA74C-1-201ENST00000580726 201 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.13□□□□□ -1.75
VRK1Q99986 AC091979.2-201ENST00000607514 214 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 AC007497.1-201ENST00000610421 561 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.13□□□□□ -1.75
VRK1Q99986 MIR6853-201ENST00000619642 74 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 AC006504.8-201ENST00000621046 635 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.13□□□□□ -1.75
VRK1Q99986 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.13□□□□□ -1.75
VRK1Q99986 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.13□□□□□ -1.75
VRK1Q99986 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 AC009812.4-201ENST00000569134 1805 ntBASIC4.13□□□□□ -1.75
VRK1Q99986 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
VRK1Q99986 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VRK1Q99986 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.13□□□□□ -1.75
VRK1Q99986 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VRK1Q99986 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VRK1Q99986 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.13□□□□□ -1.75
VRK1Q99986 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VRK1Q99986 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
VRK1Q99986 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VRK1Q99986 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VRK1Q99986 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
VRK1Q99986 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.12□□□□□ -1.75
VRK1Q99986 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.12□□□□□ -1.75
VRK1Q99986 RNU1-20P-201ENST00000363314 162 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 RNA5SP505-201ENST00000364748 108 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 AL356776.1-201ENST00000406574 447 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.12□□□□□ -1.75
VRK1Q99986 U3.35-201ENST00000408405 208 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 RN7SKP106-201ENST00000410832 272 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 RNU6-1068P-201ENST00000410958 103 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 RN7SKP100-201ENST00000411258 284 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 RPL21P111-201ENST00000418453 477 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 AC012498.1-201ENST00000424037 437 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.12□□□□□ -1.75
VRK1Q99986 MTATP6P4-201ENST00000427725 675 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 DNAJC19P7-201ENST00000428811 344 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 CYCSP43-201ENST00000438233 310 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 AL359073.1-201ENST00000448036 403 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 RPS24P6-201ENST00000452670 400 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.12□□□□□ -1.75
VRK1Q99986 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.12□□□□□ -1.75
VRK1Q99986 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.12□□□□□ -1.75
VRK1Q99986 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.12□□□□□ -1.75
VRK1Q99986 AC108022.1-201ENST00000493466 478 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 RPL38P4-201ENST00000502376 214 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.12□□□□□ -1.75
VRK1Q99986 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.12□□□□□ -1.75
VRK1Q99986 RAB9BP1-201ENST00000519581 626 ntBASIC4.12□□□□□ -1.75
VRK1Q99986 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.12□□□□□ -1.75
VRK1Q99986 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.12□□□□□ -1.75
VRK1Q99986 OR4H12P-201ENST00000556269 907 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms