Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN18Q99952 RPL35AP12-201ENST00000425362 338 ntBASIC4.79□□□□□ -1.64
PTPN18Q99952 CYCSP43-201ENST00000438233 310 ntBASIC4.79□□□□□ -1.64
PTPN18Q99952 AC006011.1-201ENST00000442758 349 ntBASIC4.79□□□□□ -1.64
PTPN18Q99952 RPS15AP36-201ENST00000492022 382 ntBASIC4.79□□□□□ -1.64
PTPN18Q99952 AC104164.2-201ENST00000496953 495 ntBASIC4.79□□□□□ -1.64
PTPN18Q99952 HMGB1P21-201ENST00000502313 581 ntBASIC4.79□□□□□ -1.64
PTPN18Q99952 AC016065.2-201ENST00000514530 444 ntBASIC4.79□□□□□ -1.64
PTPN18Q99952 SNORA40.12-201ENST00000516329 111 ntBASIC4.79□□□□□ -1.64
PTPN18Q99952 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN18Q99952 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN18Q99952 PDCD5P1-201ENST00000543528 309 ntBASIC4.79□□□□□ -1.64
PTPN18Q99952 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN18Q99952 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN18Q99952 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.79□□□□□ -1.64
PTPN18Q99952 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.79□□□□□ -1.64
PTPN18Q99952 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.79□□□□□ -1.64
PTPN18Q99952 AC243960.4-201ENST00000600532 288 ntBASIC4.79□□□□□ -1.64
PTPN18Q99952 AC106900.2-201ENST00000604994 317 ntBASIC4.79□□□□□ -1.64
PTPN18Q99952 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN18Q99952 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN18Q99952 AL603758.1-201ENST00000618654 241 ntBASIC4.79□□□□□ -1.64
PTPN18Q99952 AC009161.2-201ENST00000624626 138 ntBASIC4.79□□□□□ -1.64
PTPN18Q99952 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN18Q99952 MIR4496-201ENST00000635896 61 ntBASIC4.79□□□□□ -1.64
PTPN18Q99952 TPTEP1-208ENST00000636884 213 ntBASIC4.79□□□□□ -1.64
PTPN18Q99952 MIR1302-1-201ENST00000637932 143 ntBASIC4.79□□□□□ -1.64
PTPN18Q99952 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN18Q99952 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN18Q99952 Z95327.2-201ENST00000414579 1873 ntBASIC4.79□□□□□ -1.64
PTPN18Q99952 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN18Q99952 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
PTPN18Q99952 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN18Q99952 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PTPN18Q99952 AC011755.1-201ENST00000623763 2049 ntBASIC4.79□□□□□ -1.64
PTPN18Q99952 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN18Q99952 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPN18Q99952 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN18Q99952 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
PTPN18Q99952 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPN18Q99952 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPN18Q99952 AC107068.1-201ENST00000563286 4218 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 OR5J1P-201ENST00000313544 939 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN18Q99952 Y_RNA.67-201ENST00000362870 100 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 SNORA63C-201ENST00000364578 129 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN18Q99952 SNORA69-201ENST00000383895 132 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 Y_RNA.474-201ENST00000384341 102 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 MIR606-201ENST00000384851 96 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PTPN18Q99952 SNORD66.1-201ENST00000391230 76 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 PTMAP5-201ENST00000393073 333 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 RPL23AP25-201ENST00000430973 463 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 RPL23AP46-201ENST00000438548 490 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 AL353748.1-201ENST00000440753 474 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 MRPL50P4-201ENST00000446432 475 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 RPL7P12-201ENST00000446719 750 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 IFNWP4-201ENST00000453148 294 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 AL121877.1-201ENST00000453704 622 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 AC034159.1-201ENST00000513885 583 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 AC093853.1-201ENST00000515689 483 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 RNU7-30P-201ENST00000516835 62 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 RNU6-352P-201ENST00000516908 107 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN18Q99952 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPN18Q99952 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.78□□□□□ -1.64
PTPN18Q99952 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.78□□□□□ -1.64
PTPN18Q99952 AC034105.3-201ENST00000565294 442 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 MIR4458-201ENST00000578872 75 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN18Q99952 HMGB2P1-201ENST00000591146 634 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 AL160281.1-201ENST00000605307 311 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 AL355802.3-201ENST00000607571 545 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 AL391261.4-201ENST00000616012 481 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 AC134503.1-201ENST00000633048 54 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 AL034408.1-202ENST00000636088 415 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPN18Q99952 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.78□□□□□ -1.64
PTPN18Q99952 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN18Q99952 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN18Q99952 MTND4P27-201ENST00000450813 1354 ntBASIC4.78□□□□□ -1.64
PTPN18Q99952 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.78□□□□□ -1.65
PTPN18Q99952 AC032011.1-201ENST00000611703 1549 ntBASIC4.77□□□□□ -1.65
PTPN18Q99952 PCAT14-202ENST00000627127 3935 ntBASIC4.77□□□□□ -1.65
PTPN18Q99952 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTPN18Q99952 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PTPN18Q99952 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.77□□□□□ -1.65
PTPN18Q99952 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTPN18Q99952 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PTPN18Q99952 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PTPN18Q99952 Y_RNA.46-201ENST00000362695 102 ntBASIC4.77□□□□□ -1.65
PTPN18Q99952 Y_RNA.315-201ENST00000365117 102 ntBASIC4.77□□□□□ -1.65
PTPN18Q99952 RNU6-730P-201ENST00000383954 104 ntBASIC4.77□□□□□ -1.65
PTPN18Q99952 Y_RNA.422-201ENST00000384054 114 ntBASIC4.77□□□□□ -1.65
PTPN18Q99952 SNORA5A-201ENST00000384111 134 ntBASIC4.77□□□□□ -1.65
PTPN18Q99952 MIR34B-201ENST00000385076 84 ntBASIC4.77□□□□□ -1.65
PTPN18Q99952 RNU6-952P-201ENST00000391164 108 ntBASIC4.77□□□□□ -1.65
PTPN18Q99952 RNU6-510P-201ENST00000391239 108 ntBASIC4.77□□□□□ -1.65
PTPN18Q99952 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms