Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 AC104581.2-201ENST00000572227 430 ntBASIC1.6□□□□□ -2.15
PCNX1Q96RV3 MIR5089-201ENST00000580047 84 ntBASIC1.6□□□□□ -2.15
PCNX1Q96RV3 ABI1P1-201ENST00000603375 1120 ntBASIC1.6□□□□□ -2.15
PCNX1Q96RV3 AL035411.2-201ENST00000604022 421 ntBASIC1.6□□□□□ -2.15
PCNX1Q96RV3 AC002487.1-201ENST00000604565 994 ntBASIC1.6□□□□□ -2.15
PCNX1Q96RV3 XIST_intron.1-201ENST00000619444 68 ntBASIC1.6□□□□□ -2.15
PCNX1Q96RV3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PCNX1Q96RV3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.6□□□□□ -2.15
PCNX1Q96RV3 MIR1294-201ENST00000408503 142 ntBASIC1.6□□□□□ -2.15
PCNX1Q96RV3 TOMM22P1-201ENST00000418578 312 ntBASIC1.6□□□□□ -2.15
PCNX1Q96RV3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.6□□□□□ -2.15
PCNX1Q96RV3 AC005534.2-201ENST00000431047 433 ntBASIC1.6□□□□□ -2.15
PCNX1Q96RV3 RPS27P5-201ENST00000444247 244 ntBASIC1.6□□□□□ -2.15
PCNX1Q96RV3 SSXP1-201ENST00000453640 473 ntBASIC1.6□□□□□ -2.15
PCNX1Q96RV3 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.6□□□□□ -2.15
PCNX1Q96RV3 RPS29P12-201ENST00000460178 152 ntBASIC1.6□□□□□ -2.15
PCNX1Q96RV3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.6□□□□□ -2.15
PCNX1Q96RV3 AL160237.3-201ENST00000604114 1013 ntBASIC1.6□□□□□ -2.15
PCNX1Q96RV3 AC012150.2-201ENST00000621300 544 ntBASIC1.6□□□□□ -2.15
PCNX1Q96RV3 AC084768.2-201ENST00000622736 221 ntBASIC1.6□□□□□ -2.15
PCNX1Q96RV3 AC073348.1-201ENST00000623002 331 ntBASIC1.6□□□□□ -2.15
PCNX1Q96RV3 MTND5P7-201ENST00000413558 1798 ntBASIC1.59□□□□□ -2.15
PCNX1Q96RV3 SNORA7.1-201ENST00000363750 139 ntBASIC1.59□□□□□ -2.15
PCNX1Q96RV3 AL121972.1-201ENST00000402023 252 ntBASIC1.59□□□□□ -2.15
PCNX1Q96RV3 AL136133.1-201ENST00000413694 376 ntBASIC1.59□□□□□ -2.15
PCNX1Q96RV3 AC007390.1-201ENST00000415722 356 ntBASIC1.59□□□□□ -2.15
PCNX1Q96RV3 HMGB1P31-201ENST00000437242 427 ntBASIC1.59□□□□□ -2.15
PCNX1Q96RV3 MED6P1-201ENST00000439659 713 ntBASIC1.59□□□□□ -2.15
PCNX1Q96RV3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.59□□□□□ -2.15
PCNX1Q96RV3 SNORA31.15-201ENST00000516771 132 ntBASIC1.59□□□□□ -2.15
PCNX1Q96RV3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.59□□□□□ -2.15
PCNX1Q96RV3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.59□□□□□ -2.15
PCNX1Q96RV3 CBX3P4-201ENST00000538909 354 ntBASIC1.59□□□□□ -2.15
PCNX1Q96RV3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.59□□□□□ -2.15
PCNX1Q96RV3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.59□□□□□ -2.15
PCNX1Q96RV3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.58□□□□□ -2.16
PCNX1Q96RV3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
PCNX1Q96RV3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
PCNX1Q96RV3 MIR548J-201ENST00000408833 112 ntBASIC1.58□□□□□ -2.16
PCNX1Q96RV3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.58□□□□□ -2.16
PCNX1Q96RV3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.58□□□□□ -2.16
PCNX1Q96RV3 AC011979.1-201ENST00000472300 483 ntBASIC1.58□□□□□ -2.16
PCNX1Q96RV3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.58□□□□□ -2.16
PCNX1Q96RV3 ARL4AP2-201ENST00000507378 601 ntBASIC1.58□□□□□ -2.16
PCNX1Q96RV3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.58□□□□□ -2.16
PCNX1Q96RV3 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
PCNX1Q96RV3 OR4G1P-201ENST00000588632 938 ntBASIC1.58□□□□□ -2.16
PCNX1Q96RV3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.58□□□□□ -2.16
PCNX1Q96RV3 AC048347.1-201ENST00000624621 427 ntBASIC1.58□□□□□ -2.16
PCNX1Q96RV3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
PCNX1Q96RV3 AC007256.1-201ENST00000392253 2765 ntBASIC1.58□□□□□ -2.16
PCNX1Q96RV3 PTP4A1P1-201ENST00000420539 515 ntBASIC1.58□□□□□ -2.16
PCNX1Q96RV3 RNU1-40P-201ENST00000516816 164 ntBASIC1.58□□□□□ -2.16
PCNX1Q96RV3 RNU1-97P-201ENST00000516872 164 ntBASIC1.58□□□□□ -2.16
PCNX1Q96RV3 RNU6-250P-201ENST00000516958 103 ntBASIC1.58□□□□□ -2.16
PCNX1Q96RV3 FAM92A1P1-201ENST00000528023 890 ntBASIC1.58□□□□□ -2.16
PCNX1Q96RV3 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC1.58□□□□□ -2.16
PCNX1Q96RV3 MIR4448-201ENST00000584360 86 ntBASIC1.58□□□□□ -2.16
PCNX1Q96RV3 PSMA6P4-201ENST00000603247 718 ntBASIC1.58□□□□□ -2.16
PCNX1Q96RV3 KATNBL1P1-201ENST00000605192 748 ntBASIC1.58□□□□□ -2.16
PCNX1Q96RV3 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.58□□□□□ -2.16
PCNX1Q96RV3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
PCNX1Q96RV3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
PCNX1Q96RV3 RNA5SP457-201ENST00000363657 124 ntBASIC1.57□□□□□ -2.16
PCNX1Q96RV3 RNA5SP138-201ENST00000365098 114 ntBASIC1.57□□□□□ -2.16
PCNX1Q96RV3 Z98749.2-208ENST00000381646 500 ntBASIC1.57□□□□□ -2.16
PCNX1Q96RV3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
PCNX1Q96RV3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
PCNX1Q96RV3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.57□□□□□ -2.16
PCNX1Q96RV3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.57□□□□□ -2.16
PCNX1Q96RV3 RPL39P40-201ENST00000445481 146 ntBASIC1.57□□□□□ -2.16
PCNX1Q96RV3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.57□□□□□ -2.16
PCNX1Q96RV3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.57□□□□□ -2.16
PCNX1Q96RV3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.57□□□□□ -2.16
PCNX1Q96RV3 SNORA25.15-201ENST00000516487 89 ntBASIC1.57□□□□□ -2.16
PCNX1Q96RV3 AC022634.1-201ENST00000520765 532 ntBASIC1.57□□□□□ -2.16
PCNX1Q96RV3 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.57□□□□□ -2.16
PCNX1Q96RV3 AC124283.4-201ENST00000581815 456 ntBASIC1.57□□□□□ -2.16
PCNX1Q96RV3 AC092954.1-201ENST00000609121 445 ntBASIC1.57□□□□□ -2.16
PCNX1Q96RV3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.57□□□□□ -2.16
PCNX1Q96RV3 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.57□□□□□ -2.16
PCNX1Q96RV3 MIR96-201ENST00000362288 78 ntBASIC1.57□□□□□ -2.16
PCNX1Q96RV3 RNU6-882P-201ENST00000391025 103 ntBASIC1.57□□□□□ -2.16
PCNX1Q96RV3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.57□□□□□ -2.16
PCNX1Q96RV3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC1.57□□□□□ -2.16
PCNX1Q96RV3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.57□□□□□ -2.16
PCNX1Q96RV3 HMGB3P15-201ENST00000507326 574 ntBASIC1.57□□□□□ -2.16
PCNX1Q96RV3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.57□□□□□ -2.16
PCNX1Q96RV3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.57□□□□□ -2.16
PCNX1Q96RV3 AL121917.1-203ENST00000605534 577 ntBASIC1.57□□□□□ -2.16
PCNX1Q96RV3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.57□□□□□ -2.16
PCNX1Q96RV3 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC1.57□□□□□ -2.16
PCNX1Q96RV3 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
PCNX1Q96RV3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.56□□□□□ -2.16
PCNX1Q96RV3 Y_RNA.303-201ENST00000364998 94 ntBASIC1.56□□□□□ -2.16
PCNX1Q96RV3 RNY1P4-201ENST00000384595 115 ntBASIC1.56□□□□□ -2.16
PCNX1Q96RV3 RAD23BP2-201ENST00000416003 1207 ntBASIC1.56□□□□□ -2.16
PCNX1Q96RV3 NEK4P1-201ENST00000433383 879 ntBASIC1.56□□□□□ -2.16
PCNX1Q96RV3 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.56□□□□□ -2.16
PCNX1Q96RV3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms