Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 RPL21P112-201ENST00000434403 463 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 RPS29P9-201ENST00000440360 171 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AL137792.2-201ENST00000443484 235 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 ELOCP24-201ENST00000456370 334 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 MTND5P22-201ENST00000458380 195 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AC008481.1-201ENST00000463278 396 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 RPL37P6-202ENST00000464216 403 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 HIGD1AP13-201ENST00000509878 289 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 RNU6-685P-201ENST00000517088 95 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 RNU6-988P-201ENST00000519081 107 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AC103783.1-201ENST00000520506 373 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AL121576.1-201ENST00000556055 276 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 OR1F2P-201ENST00000570470 933 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AF038458.1-201ENST00000588406 262 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AC006254.3-201ENST00000603353 884 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 TUG1_2.1-201ENST00000614234 87 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AL589994.2-201ENST00000621124 579 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 MIR6730-201ENST00000622213 67 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.69□□□□□ -1.66
PTCHD1Q96NR3 AC011755.1-201ENST00000623763 2049 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 AC116667.1-201ENST00000604855 2072 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 RN7SKP104-201ENST00000362605 328 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 RNU6-946P-201ENST00000383878 107 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 AL109941.1-201ENST00000401925 229 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 AL139397.2-201ENST00000404529 772 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 SNORA11B-201ENST00000408175 129 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 CTSL3P-202ENST00000412179 788 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 RPL31P12-201ENST00000422587 358 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 AL590762.4-201ENST00000425885 253 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 RPL23AP89-201ENST00000439324 255 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 AC091685.2-201ENST00000454924 864 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 AC106782.4-201ENST00000568264 210 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 TVP23CP2-201ENST00000571473 623 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 AC100830.2-201ENST00000581636 240 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 RMST_9.1-201ENST00000619945 193 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 7SK.10-201ENST00000621414 298 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 AC019206.1-201ENST00000621938 425 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 AC091925.1-201ENST00000623204 462 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 AC108751.5-201ENST00000492880 1336 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 MTND5P19-201ENST00000424872 1794 ntBASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTCHD1Q96NR3 THAP12P5-201ENST00000405864 2275 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 Y_RNA.112-201ENST00000363250 102 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 Y_RNA.133-201ENST00000363428 110 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 SMIM11P1-201ENST00000369586 178 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 SNORD116-11-201ENST00000383882 92 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 RNU6-1105P-201ENST00000384774 107 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 MIR550A3-201ENST00000390735 95 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AL356057.3-201ENST00000402607 340 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 RNA5SP56-201ENST00000410277 118 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 RNU6-954P-201ENST00000411355 107 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 OR2AM1P-201ENST00000422137 422 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 AL450023.3-201ENST00000440592 271 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 IPO7P1-201ENST00000442031 636 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 MTCO3P45-201ENST00000443036 613 ntBASIC4.67□□□□□ -1.66
PTCHD1Q96NR3 RPL7AP61-201ENST00000443410 636 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms