Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 LARP7P2-201ENST00000575306 125 ntBASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 BBIP1P1-201ENST00000602999 279 ntBASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 AL162413.1-201ENST00000603198 110 ntBASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 AC055876.5-201ENST00000605667 259 ntBASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 AC093788.1-201ENST00000609356 927 ntBASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 AC009159.1-201ENST00000618386 642 ntBASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 AC112204.3-201ENST00000623822 332 ntBASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 AC112487.2-201ENST00000637950 304 ntBASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 AC024560.2-201ENST00000507981 1497 ntBASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.29□□□□□ -1.72
PDLIM2Q96JY6 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 AL592148.3-201ENST00000608771 2646 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 Z73965.1-201ENST00000623412 2297 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 Y_RNA.46-201ENST00000362695 102 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 RNU6-921P-201ENST00000384361 107 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 EIF5P1-201ENST00000400019 1231 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 AL356057.2-201ENST00000403318 432 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 RPL7P25-201ENST00000404151 721 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 SDCBPP3-201ENST00000419629 891 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 RPEP3-201ENST00000425462 676 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 AC008850.1-201ENST00000427546 362 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 AC017083.1-201ENST00000428093 483 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 RPL7P54-201ENST00000438336 674 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 SDCBPP1-201ENST00000440192 890 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 CALM1P1-201ENST00000442082 433 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 AC002381.1-201ENST00000447049 280 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 FDX1P2-201ENST00000450769 375 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 AC099522.1-202ENST00000514718 367 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 Y_RNA.675-201ENST00000516389 149 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 RNU6-1153P-201ENST00000516760 105 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 SUB1P2-201ENST00000556401 297 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 AC007621.1-201ENST00000604544 437 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 MIR6748-201ENST00000610433 71 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 AP006248.2-201ENST00000623309 592 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 AC010149.2-201ENST00000637608 315 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 AC024614.3-201ENST00000637860 256 ntBASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDLIM2Q96JY6 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 AC007685.1-201ENST00000329806 452 ntBASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 Y_RNA.86-201ENST00000363020 111 ntBASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 Y_RNA.142-201ENST00000363491 102 ntBASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 Y_RNA.529-201ENST00000384586 119 ntBASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 MIR199A2-201ENST00000385289 110 ntBASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 AL031679.1-201ENST00000400616 525 ntBASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 RPS20P15-201ENST00000412792 311 ntBASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 RNU6-420P-201ENST00000458780 107 ntBASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 AC006463.2-201ENST00000473326 348 ntBASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 AC090453.1-201ENST00000495560 436 ntBASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 AK3P4-201ENST00000504283 583 ntBASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.27□□□□□ -1.73
PDLIM2Q96JY6 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms