Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RNU6-628P-201ENST00000410675 107 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.15□□□□□ -1.91
RFT1Q96AA3 AC245291.1-201ENST00000419501 328 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 AC090960.1-201ENST00000421072 306 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.15□□□□□ -1.91
RFT1Q96AA3 AL589823.1-201ENST00000429577 183 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.15□□□□□ -1.91
RFT1Q96AA3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.15□□□□□ -1.91
RFT1Q96AA3 AL353705.1-201ENST00000433468 480 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 GOT2P5-201ENST00000433995 546 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 LSM1P1-201ENST00000438629 273 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 RPL26P6-201ENST00000440913 438 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 AC112653.1-201ENST00000443851 386 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 RPL21P89-201ENST00000444021 467 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.15□□□□□ -1.91
RFT1Q96AA3 ATG12P2-201ENST00000456830 416 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.15□□□□□ -1.91
RFT1Q96AA3 RPL21P8-201ENST00000465083 535 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 AC017015.1-201ENST00000477387 286 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 AC034222.1-201ENST00000494052 532 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.15□□□□□ -1.91
RFT1Q96AA3 AC010460.1-201ENST00000507087 466 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 CBX3P3-201ENST00000508108 532 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 POU5F1P7-201ENST00000508759 541 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 AC109464.2-201ENST00000510242 943 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 AC026801.2-201ENST00000515352 425 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 SNORA70.16-201ENST00000516390 95 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.15□□□□□ -1.91
RFT1Q96AA3 AP000926.4-201ENST00000527351 454 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 DEFB108D-201ENST00000527787 222 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.15□□□□□ -1.91
RFT1Q96AA3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.15□□□□□ -1.91
RFT1Q96AA3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.15□□□□□ -1.91
RFT1Q96AA3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.15□□□□□ -1.91
RFT1Q96AA3 AC006539.2-201ENST00000601729 572 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 Z99497.2-201ENST00000603634 310 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 AC019176.2-201ENST00000611579 315 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 MIR378J-201ENST00000611988 109 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 AC009090.3-201ENST00000616553 565 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 AC131159.1-201ENST00000621854 213 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 AC110801.1-201ENST00000623590 212 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.15□□□□□ -1.91
RFT1Q96AA3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.15□□□□□ -1.91
RFT1Q96AA3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.15□□□□□ -1.91
RFT1Q96AA3 AC090740.1-201ENST00000623193 2262 ntBASIC3.15□□□□□ -1.91
RFT1Q96AA3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
RFT1Q96AA3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
RFT1Q96AA3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RFT1Q96AA3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.14□□□□□ -1.91
RFT1Q96AA3 Y_RNA.18-201ENST00000362461 102 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 Y_RNA.302-201ENST00000364997 102 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 RNU6-76P-201ENST00000384060 104 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 MIR141-201ENST00000384975 95 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 AL590084.2-201ENST00000401481 382 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 SNORA3.3-201ENST00000408712 125 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RFT1Q96AA3 AC093578.1-201ENST00000415219 368 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RFT1Q96AA3 AC068533.1-201ENST00000418542 415 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.14□□□□□ -1.91
RFT1Q96AA3 AL139247.1-201ENST00000422768 325 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 PPP1R11P2-201ENST00000423543 382 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 AL445669.1-201ENST00000426743 755 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.14□□□□□ -1.91
RFT1Q96AA3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.14□□□□□ -1.91
RFT1Q96AA3 AL591503.2-201ENST00000442314 1005 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.14□□□□□ -1.91
RFT1Q96AA3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.14□□□□□ -1.91
RFT1Q96AA3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RFT1Q96AA3 AC073387.1-201ENST00000453261 709 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 HMGN1P18-201ENST00000457642 277 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 RPS26P21-201ENST00000475397 348 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 VN1R104P-201ENST00000505115 1009 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.14□□□□□ -1.91
RFT1Q96AA3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.14□□□□□ -1.91
RFT1Q96AA3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.14□□□□□ -1.91
RFT1Q96AA3 RNU2-27P-201ENST00000516185 142 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 SNORA31.22-201ENST00000517204 135 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 AP006245.1-201ENST00000522549 120 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.14□□□□□ -1.91
RFT1Q96AA3 MTCO1P47-201ENST00000523889 1271 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 FAM60DP-201ENST00000524174 632 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.14□□□□□ -1.91
RFT1Q96AA3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.14□□□□□ -1.91
RFT1Q96AA3 ELOCP32-201ENST00000548625 324 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.14□□□□□ -1.91
RFT1Q96AA3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.14□□□□□ -1.91
RFT1Q96AA3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.14□□□□□ -1.91
RFT1Q96AA3 AC109446.2-201ENST00000567872 497 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 AC135628.1-201ENST00000568867 534 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 AC034268.2-201ENST00000571784 482 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.14□□□□□ -1.91
RFT1Q96AA3 MIR3921-201ENST00000577308 85 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 AC087499.8-201ENST00000578406 226 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.14□□□□□ -1.91
RFT1Q96AA3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.14□□□□□ -1.91
RFT1Q96AA3 AC105224.1-201ENST00000587055 421 ntBASIC3.14□□□□□ -1.91
RFT1Q96AA3 UBE2L4-201ENST00000587688 464 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms