Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC108729.3-201ENST00000513484 108 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 RN7SKP219-201ENST00000516825 296 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AP003066.2-201ENST00000529375 555 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AC074029.1-201ENST00000552531 1044 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AC115085.1-201ENST00000588924 229 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AC023043.2-201ENST00000589678 1026 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AC008759.3-201ENST00000613300 508 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 AC104763.3-201ENST00000613765 618 ntBASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SHROOM3Q8TF72 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 RNU6-207P-201ENST00000384137 107 ntBASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 MIR124-3-201ENST00000384866 87 ntBASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 RAC1P8-201ENST00000427086 527 ntBASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 HIGD1AP2-201ENST00000446367 280 ntBASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 AL929288.2-201ENST00000446368 407 ntBASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 TVP23BP2-201ENST00000455082 615 ntBASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 AC092754.2-201ENST00000463506 460 ntBASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 AC234781.5-201ENST00000508429 271 ntBASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 TBCAP3-201ENST00000512475 312 ntBASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 AC008562.1-201ENST00000521763 330 ntBASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 LRRC6P1-201ENST00000532188 885 ntBASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 AL133445.2-201ENST00000611191 527 ntBASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 AC006213.4-201ENST00000616184 634 ntBASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 AC092608.2-201ENST00000624427 218 ntBASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 AL590396.4-201ENST00000636779 956 ntBASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 SEC63P2-201ENST00000503863 1939 ntBASIC2.35□□□□□ -2.03
SHROOM3Q8TF72 AC011155.1-201ENST00000316512 456 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 RNU5B-4P-201ENST00000363508 111 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 OR5H15-201ENST00000383696 930 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 MTCYBP15-201ENST00000433123 1127 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 AC129850.1-201ENST00000436203 508 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 AC004263.1-201ENST00000479327 332 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 HMGB1P38-201ENST00000490557 577 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 TRAV31-201ENST00000502780 342 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 AC016550.1-201ENST00000505348 785 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 PTP4A1P6-201ENST00000531034 478 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 AC018630.1-201ENST00000541376 925 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 AC011611.5-201ENST00000552477 578 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 AC099785.1-201ENST00000605697 437 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 AC097504.2-201ENST00000608088 454 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 AL121652.1-201ENST00000608851 448 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 AC093673.2-201ENST00000609674 331 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 AC104237.2-201ENST00000612456 443 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 PISRT1-201ENST00000626175 531 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 MFSD8-245ENST00000641743 948 ntBASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.34□□□□□ -2.03
SHROOM3Q8TF72 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 MIR489-201ENST00000384923 84 ntBASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 MCTS2P-201ENST00000394552 546 ntBASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 RPL31P52-201ENST00000407532 367 ntBASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 AC005912.1-201ENST00000495392 255 ntBASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 TPT1P8-201ENST00000510120 555 ntBASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 AC087894.1-201ENST00000538359 518 ntBASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 MTCYBP28-201ENST00000566728 1132 ntBASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 MIR4716-201ENST00000579628 84 ntBASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 AC011494.1-201ENST00000596454 237 ntBASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 AC091057.3-201ENST00000602684 733 ntBASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 AC103710.2-201ENST00000609912 942 ntBASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.34□□□□□ -2.04
SHROOM3Q8TF72 AC022079.2-201ENST00000619739 566 ntBASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms