Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.29□□□□□ -2.04
LMX1AQ8TE12 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.29□□□□□ -2.04
LMX1AQ8TE12 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.29□□□□□ -2.04
LMX1AQ8TE12 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.29□□□□□ -2.04
LMX1AQ8TE12 AC010468.3-201ENST00000508225 458 ntBASIC2.29□□□□□ -2.04
LMX1AQ8TE12 AC104108.1-201ENST00000509930 412 ntBASIC2.29□□□□□ -2.04
LMX1AQ8TE12 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.29□□□□□ -2.04
LMX1AQ8TE12 AC022690.1-201ENST00000526681 550 ntBASIC2.29□□□□□ -2.04
LMX1AQ8TE12 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.29□□□□□ -2.04
LMX1AQ8TE12 AP000916.1-201ENST00000533869 835 ntBASIC2.29□□□□□ -2.04
LMX1AQ8TE12 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
LMX1AQ8TE12 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.29□□□□□ -2.04
LMX1AQ8TE12 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.29□□□□□ -2.04
LMX1AQ8TE12 MIR1273D-201ENST00000577266 86 ntBASIC2.29□□□□□ -2.04
LMX1AQ8TE12 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.29□□□□□ -2.04
LMX1AQ8TE12 AC092474.3-201ENST00000603022 568 ntBASIC2.29□□□□□ -2.04
LMX1AQ8TE12 AC016542.1-201ENST00000608259 493 ntBASIC2.29□□□□□ -2.04
LMX1AQ8TE12 VN1R9P-201ENST00000614184 867 ntBASIC2.29□□□□□ -2.04
LMX1AQ8TE12 AC009159.1-201ENST00000618386 642 ntBASIC2.29□□□□□ -2.04
LMX1AQ8TE12 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.29□□□□□ -2.04
LMX1AQ8TE12 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.29□□□□□ -2.04
LMX1AQ8TE12 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.29□□□□□ -2.04
LMX1AQ8TE12 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
LMX1AQ8TE12 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
LMX1AQ8TE12 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LMX1AQ8TE12 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
LMX1AQ8TE12 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
LMX1AQ8TE12 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
LMX1AQ8TE12 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LMX1AQ8TE12 RNA5SP258-201ENST00000362750 119 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 RNU6-263P-201ENST00000363811 107 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.28□□□□□ -2.04
LMX1AQ8TE12 CD24P4-201ENST00000382840 243 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 RNU6-253P-201ENST00000384730 105 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LMX1AQ8TE12 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 RNU4-27P-201ENST00000410889 139 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.28□□□□□ -2.04
LMX1AQ8TE12 BX276092.3-201ENST00000424182 230 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 UBE2D3P2-201ENST00000424409 445 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 MTATP6P11-201ENST00000428071 670 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.28□□□□□ -2.04
LMX1AQ8TE12 AC109583.1-201ENST00000432156 268 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 AC010881.1-201ENST00000433830 235 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
LMX1AQ8TE12 RPL23AP58-201ENST00000440453 469 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 RABEPKP1-201ENST00000440529 1026 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 WASF1P1-201ENST00000447560 1131 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 AL353718.1-201ENST00000451028 517 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 snoU13.15-201ENST00000459407 104 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 LINC00888-204ENST00000487386 421 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 AC092436.1-201ENST00000506450 503 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 MTCO3P44-201ENST00000510977 541 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.28□□□□□ -2.04
LMX1AQ8TE12 RNU6-202P-201ENST00000515998 96 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 RNU6-416P-201ENST00000516265 103 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 EEF1A1P37-201ENST00000522748 715 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 ERHP1-201ENST00000523006 310 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 MTCYBP20-201ENST00000524239 1129 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 AC124293.1-201ENST00000530034 493 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.28□□□□□ -2.04
LMX1AQ8TE12 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.28□□□□□ -2.04
LMX1AQ8TE12 AC087481.2-201ENST00000565492 330 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.28□□□□□ -2.04
LMX1AQ8TE12 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.28□□□□□ -2.04
LMX1AQ8TE12 AL671309.1-201ENST00000603750 544 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 AC128687.1-201ENST00000605304 619 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.28□□□□□ -2.04
LMX1AQ8TE12 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.28□□□□□ -2.04
LMX1AQ8TE12 AL354696.1-201ENST00000614652 497 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.28□□□□□ -2.04
LMX1AQ8TE12 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.28□□□□□ -2.04
LMX1AQ8TE12 AL590396.2-201ENST00000636511 1041 ntBASIC2.28□□□□□ -2.04
LMX1AQ8TE12 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 AC091564.4-201ENST00000533934 2194 ntBASIC2.27□□□□□ -2.05
LMX1AQ8TE12 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 RNU6-799P-201ENST00000363567 107 ntBASIC2.27□□□□□ -2.05
LMX1AQ8TE12 RNU6-650P-201ENST00000365658 111 ntBASIC2.27□□□□□ -2.05
LMX1AQ8TE12 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 FAM204CP-201ENST00000424489 642 ntBASIC2.27□□□□□ -2.05
LMX1AQ8TE12 TOMM20P4-201ENST00000427861 435 ntBASIC2.27□□□□□ -2.05
LMX1AQ8TE12 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 MTCYBP34-201ENST00000439552 670 ntBASIC2.27□□□□□ -2.05
LMX1AQ8TE12 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 XKRY-201ENST00000510392 1100 ntBASIC2.27□□□□□ -2.05
LMX1AQ8TE12 IGKV3-31-201ENST00000523109 329 ntBASIC2.27□□□□□ -2.05
LMX1AQ8TE12 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms