Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 AC096577.2-201ENST00000611455 153 ntBASIC5.22□□□□□ -1.57
LINC00116Q8NCU8 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.22□□□□□ -1.57
LINC00116Q8NCU8 CYP3A51P-201ENST00000633513 256 ntBASIC5.22□□□□□ -1.57
LINC00116Q8NCU8 AL034408.1-202ENST00000636088 415 ntBASIC5.22□□□□□ -1.57
LINC00116Q8NCU8 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.22□□□□□ -1.57
LINC00116Q8NCU8 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.22□□□□□ -1.57
LINC00116Q8NCU8 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LINC00116Q8NCU8 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LINC00116Q8NCU8 AL022311.1-201ENST00000623726 19416 ntBASIC5.21□□□□□ -1.57
LINC00116Q8NCU8 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
LINC00116Q8NCU8 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 Y_RNA.474-201ENST00000384341 102 ntBASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 MIR606-201ENST00000384851 96 ntBASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 MIR92A2-201ENST00000385299 75 ntBASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 SNORD37.1-201ENST00000390968 65 ntBASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 MIR1179-201ENST00000408703 91 ntBASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 SNORA57.3-201ENST00000411095 141 ntBASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 RPS7P15-201ENST00000415804 584 ntBASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 RPL31P45-201ENST00000419532 356 ntBASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 RPS26P2-201ENST00000440331 348 ntBASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 RPS26P56-201ENST00000444468 240 ntBASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 AC006511.1-201ENST00000470614 315 ntBASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 MIR4504-201ENST00000577413 92 ntBASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 AC087499.8-201ENST00000578406 226 ntBASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 AC019176.2-201ENST00000611579 315 ntBASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 AC079597.1-201ENST00000624306 508 ntBASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
LINC00116Q8NCU8 MAPK10-372ENST00000641954 3413 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 MTCO1P9-201ENST00000505577 1534 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 RNU6-1207P-201ENST00000384343 107 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 MIR483-201ENST00000385070 76 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 SNORA75.4-201ENST00000391278 119 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 AC012065.2-201ENST00000421295 375 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 AL590233.1-201ENST00000430017 456 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 AL358472.1-201ENST00000431295 329 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 AL138799.3-201ENST00000438968 350 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 DDX3P2-201ENST00000446138 111 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 AL356010.1-201ENST00000456364 102 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 RPS20P21-201ENST00000466859 343 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 AC005726.1-201ENST00000494679 427 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 AC093677.1-201ENST00000514414 678 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 SNORA74D-201ENST00000516404 141 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 SCARNA13-201ENST00000516672 275 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 BNIP3P6-201ENST00000549284 499 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 AC093249.1-201ENST00000567049 203 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 AC068790.3-201ENST00000602988 553 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 AL391261.4-201ENST00000616012 481 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 AC090971.5-201ENST00000621102 293 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 AC079684.1-201ENST00000621405 437 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 AL118496.1-201ENST00000440201 1812 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 AL731532.2-201ENST00000623542 1953 ntBASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.2□□□□□ -1.58
LINC00116Q8NCU8 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.19□□□□□ -1.58
LINC00116Q8NCU8 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.19□□□□□ -1.58
LINC00116Q8NCU8 AC097714.1-201ENST00000511272 1647 ntBASIC5.19□□□□□ -1.58
LINC00116Q8NCU8 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
LINC00116Q8NCU8 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LINC00116Q8NCU8 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LINC00116Q8NCU8 MIR133A2-201ENST00000347538 102 ntBASIC5.19□□□□□ -1.58
LINC00116Q8NCU8 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LINC00116Q8NCU8 Y_RNA.387-201ENST00000383918 102 ntBASIC5.19□□□□□ -1.58
LINC00116Q8NCU8 RNU6-606P-201ENST00000384721 111 ntBASIC5.19□□□□□ -1.58
LINC00116Q8NCU8 AC073136.2-201ENST00000417282 849 ntBASIC5.19□□□□□ -1.58
LINC00116Q8NCU8 AC127526.1-201ENST00000417526 366 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms