Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RETREG2Q8NC44 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RETREG2Q8NC44 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RETREG2Q8NC44 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RETREG2Q8NC44 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
RETREG2Q8NC44 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RETREG2Q8NC44 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RETREG2Q8NC44 RNA5SP52-201ENST00000362448 134 ntBASIC5.76□□□□□ -1.49
RETREG2Q8NC44 SNORA73.1-201ENST00000363107 205 ntBASIC5.76□□□□□ -1.49
RETREG2Q8NC44 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RETREG2Q8NC44 Y_RNA.384-201ENST00000383909 102 ntBASIC5.76□□□□□ -1.49
RETREG2Q8NC44 Y_RNA.399-201ENST00000383955 105 ntBASIC5.76□□□□□ -1.49
RETREG2Q8NC44 RNA5SP87-201ENST00000384155 118 ntBASIC5.76□□□□□ -1.49
RETREG2Q8NC44 RNU6-14P-201ENST00000384630 106 ntBASIC5.76□□□□□ -1.49
RETREG2Q8NC44 LAP3P1-201ENST00000403648 294 ntBASIC5.76□□□□□ -1.49
RETREG2Q8NC44 AL591848.1-201ENST00000413092 322 ntBASIC5.76□□□□□ -1.49
RETREG2Q8NC44 RPL27AP8-201ENST00000424277 446 ntBASIC5.76□□□□□ -1.49
RETREG2Q8NC44 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.76□□□□□ -1.49
RETREG2Q8NC44 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.76□□□□□ -1.49
RETREG2Q8NC44 PRPS1P1-201ENST00000445305 876 ntBASIC5.76□□□□□ -1.49
RETREG2Q8NC44 AC087588.1-201ENST00000462203 316 ntBASIC5.76□□□□□ -1.49
RETREG2Q8NC44 RPL5P30-201ENST00000465511 891 ntBASIC5.76□□□□□ -1.49
RETREG2Q8NC44 AC007016.1-201ENST00000512110 244 ntBASIC5.76□□□□□ -1.49
RETREG2Q8NC44 RNU6-864P-201ENST00000516256 108 ntBASIC5.76□□□□□ -1.49
RETREG2Q8NC44 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.76□□□□□ -1.49
RETREG2Q8NC44 AC022968.1-201ENST00000567372 442 ntBASIC5.76□□□□□ -1.49
RETREG2Q8NC44 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.76□□□□□ -1.49
RETREG2Q8NC44 AC002545.1-201ENST00000592511 181 ntBASIC5.76□□□□□ -1.49
RETREG2Q8NC44 AC022893.3-201ENST00000607665 437 ntBASIC5.76□□□□□ -1.49
RETREG2Q8NC44 AL161616.1-201ENST00000611867 286 ntBASIC5.76□□□□□ -1.49
RETREG2Q8NC44 AC034102.8-201ENST00000615146 484 ntBASIC5.76□□□□□ -1.49
RETREG2Q8NC44 AC067931.1-201ENST00000624190 671 ntBASIC5.76□□□□□ -1.49
RETREG2Q8NC44 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RETREG2Q8NC44 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RETREG2Q8NC44 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RETREG2Q8NC44 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RETREG2Q8NC44 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RETREG2Q8NC44 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 AC116096.1-201ENST00000566804 2314 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 MUC2-202ENST00000613187 4845 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 RNU4-79P-201ENST00000362764 141 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 RN7SKP95-201ENST00000362860 303 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 MIR514A1-201ENST00000385133 98 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 AL583835.1-201ENST00000399570 407 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 AL590139.1-201ENST00000416267 400 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 AC104333.2-201ENST00000422630 192 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 AF228730.2-201ENST00000438784 848 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 AC083904.1-201ENST00000487828 231 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 AC140172.1-201ENST00000502928 141 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 HMGN1P13-201ENST00000505795 138 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 RNU6-1038P-201ENST00000516516 104 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 RAB9BP1-201ENST00000519581 626 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 AC026464.5-201ENST00000562497 722 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 AL355375.2-201ENST00000574825 175 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 MIR4270-201ENST00000581799 70 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 MIR4691-201ENST00000583764 85 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 AC103710.3-201ENST00000608157 948 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 AC107294.1-201ENST00000609524 467 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 MIR378J-201ENST00000611988 109 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 AC126177.8-201ENST00000618339 1015 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 BX005214.3-202ENST00000619809 325 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 AC139713.2-214ENST00000642059 1811 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 SMG1P4-204ENST00000523028 4131 ntBASIC5.75□□□□□ -1.49
RETREG2Q8NC44 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RETREG2Q8NC44 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
RETREG2Q8NC44 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
RETREG2Q8NC44 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.74□□□□□ -1.49
RETREG2Q8NC44 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms