Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AC004832.5-201ENST00000608677 401 ntBASIC3.66□□□□□ -1.82
CCDC89Q8N998 AC004852.3-201ENST00000614131 326 ntBASIC3.66□□□□□ -1.82
CCDC89Q8N998 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC89Q8N998 AP002782.1-201ENST00000623107 614 ntBASIC3.66□□□□□ -1.82
CCDC89Q8N998 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC89Q8N998 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC89Q8N998 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC89Q8N998 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC89Q8N998 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC89Q8N998 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.65□□□□□ -1.82
CCDC89Q8N998 MFSD8-236ENST00000641509 4050 ntBASIC3.65□□□□□ -1.82
CCDC89Q8N998 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
CCDC89Q8N998 MIR30E-201ENST00000362104 92 ntBASIC3.65□□□□□ -1.83
CCDC89Q8N998 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
CCDC89Q8N998 RNU6-723P-201ENST00000383973 107 ntBASIC3.65□□□□□ -1.83
CCDC89Q8N998 MIR1289-1-201ENST00000408836 144 ntBASIC3.65□□□□□ -1.83
CCDC89Q8N998 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC89Q8N998 AL645937.1-202ENST00000421799 937 ntBASIC3.65□□□□□ -1.83
CCDC89Q8N998 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC89Q8N998 BMI1P1-201ENST00000445879 941 ntBASIC3.65□□□□□ -1.83
CCDC89Q8N998 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC89Q8N998 MTND4LP3-201ENST00000468320 276 ntBASIC3.65□□□□□ -1.83
CCDC89Q8N998 AP002884.2-201ENST00000471647 395 ntBASIC3.65□□□□□ -1.83
CCDC89Q8N998 AC106872.3-201ENST00000495104 446 ntBASIC3.65□□□□□ -1.83
CCDC89Q8N998 AC091951.3-201ENST00000504093 246 ntBASIC3.65□□□□□ -1.83
CCDC89Q8N998 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC89Q8N998 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC89Q8N998 RNU5A-4P-201ENST00000516588 111 ntBASIC3.65□□□□□ -1.83
CCDC89Q8N998 RANP9-201ENST00000519957 271 ntBASIC3.65□□□□□ -1.83
CCDC89Q8N998 NDUFB9P3-201ENST00000521269 501 ntBASIC3.65□□□□□ -1.83
CCDC89Q8N998 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC89Q8N998 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC89Q8N998 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC89Q8N998 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC89Q8N998 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC89Q8N998 TRAV28-201ENST00000557548 323 ntBASIC3.65□□□□□ -1.83
CCDC89Q8N998 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC89Q8N998 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC89Q8N998 AC005951.2-201ENST00000576282 495 ntBASIC3.65□□□□□ -1.83
CCDC89Q8N998 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC89Q8N998 U73023.1-201ENST00000603134 700 ntBASIC3.65□□□□□ -1.83
CCDC89Q8N998 AC010133.1-201ENST00000615809 842 ntBASIC3.65□□□□□ -1.83
CCDC89Q8N998 AL391262.2-201ENST00000622466 494 ntBASIC3.65□□□□□ -1.83
CCDC89Q8N998 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC89Q8N998 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC89Q8N998 AC099654.7-201ENST00000635788 2127 ntBASIC3.65□□□□□ -1.83
CCDC89Q8N998 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CCDC89Q8N998 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC89Q8N998 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC89Q8N998 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC89Q8N998 RNU1-75P-201ENST00000347264 129 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 AP002088.1-201ENST00000382740 395 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 MIR513B-201ENST00000385136 84 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 MIR1305-201ENST00000408300 86 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 RN7SKP140-201ENST00000411196 284 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 HMGN1P24-201ENST00000412282 298 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 UBE2FP1-201ENST00000416536 447 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC89Q8N998 AC092047.1-201ENST00000424997 240 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 AP000907.1-201ENST00000428428 510 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 AL035407.1-201ENST00000429211 571 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC89Q8N998 AL117351.1-201ENST00000438864 766 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 Z82210.1-201ENST00000440037 231 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 RPL23AP58-201ENST00000440453 469 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.64□□□□□ -1.83
CCDC89Q8N998 AC021205.2-201ENST00000480069 347 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 RPS4XP22-201ENST00000480755 780 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC89Q8N998 AC022447.3-201ENST00000506865 495 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 AC110768.1-201ENST00000509222 400 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 CDC42P4-201ENST00000510507 563 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 RAC1P5-201ENST00000512182 576 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.64□□□□□ -1.83
CCDC89Q8N998 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.64□□□□□ -1.83
CCDC89Q8N998 RN7SKP157-201ENST00000516174 282 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 NRON-201ENST00000517270 370 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC89Q8N998 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC89Q8N998 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC89Q8N998 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC89Q8N998 AC136618.2-201ENST00000575091 400 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC89Q8N998 DUXAP4-201ENST00000603046 613 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 AC103710.4-201ENST00000609301 899 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
CCDC89Q8N998 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC89Q8N998 ZNF876P-202ENST00000398732 1485 ntBASIC3.64□□□□□ -1.83
CCDC89Q8N998 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC89Q8N998 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC89Q8N998 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC89Q8N998 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC89Q8N998 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC89Q8N998 FAM35CP-201ENST00000554755 2470 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC89Q8N998 MFSD8-233ENST00000641482 4860 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 RNU6-931P-201ENST00000363850 107 ntBASIC3.63□□□□□ -1.83
CCDC89Q8N998 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CCDC89Q8N998 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms