Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC020895.1-201ENST00000595362 272 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AL353748.2-201ENST00000622148 471 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AC091925.2-201ENST00000625059 256 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AL049780.3-201ENST00000624612 1583 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 MTCO1P23-201ENST00000415223 1526 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 AC006378.2-201ENST00000623178 2476 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 ASNSP3-201ENST00000451989 1306 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 SNORA11.1-201ENST00000408133 129 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 RNA5SP38-201ENST00000410750 119 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 LSM1P1-201ENST00000438629 273 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 RABEPKP1-201ENST00000440529 1026 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 RPS24P13-201ENST00000442520 397 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 AC013828.1-201ENST00000481845 158 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 AC103975.1-201ENST00000482506 483 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 AC008427.1-201ENST00000503102 655 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 KLRA1P-201ENST00000503499 986 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 SUMO2P5-201ENST00000506790 245 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 AC105914.1-201ENST00000511798 226 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 RNA5SP76-201ENST00000516277 87 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 EEF1B2P4-201ENST00000551398 348 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 AC104072.1-201ENST00000568817 668 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 MIR3200-201ENST00000580767 85 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 AC023043.3-201ENST00000593113 385 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 AC093673.2-201ENST00000609674 331 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 AP002371.2-201ENST00000624450 503 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 FAM35BP-202ENST00000497389 3337 ntBASIC3.03□□□□□ -1.92
CCDC65Q8IXS2 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.03□□□□□ -1.93
CCDC65Q8IXS2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 AL139095.1-201ENST00000404326 391 ntBASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 RNA5SP21-201ENST00000410917 96 ntBASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 AC092393.1-201ENST00000439625 742 ntBASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 AC093752.1-206ENST00000511823 336 ntBASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 MTND5P4-201ENST00000514978 288 ntBASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 RNA5SP367-201ENST00000516557 118 ntBASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 AP003102.1-201ENST00000525638 661 ntBASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 AC128657.1-201ENST00000549459 145 ntBASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 AL355836.1-201ENST00000555951 870 ntBASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 AC074050.1-201ENST00000563247 211 ntBASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 RPL23AP78-201ENST00000599928 470 ntBASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 AC024060.1-201ENST00000607052 494 ntBASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 AL138955.1-201ENST00000622881 1040 ntBASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 CR381653.2-201ENST00000624041 768 ntBASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 CYP3A51P-201ENST00000633513 256 ntBASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 AL137790.1-201ENST00000634283 177 ntBASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 Z82195.2-201ENST00000612348 18351 ntBASIC3.02□□□□□ -1.93
CCDC65Q8IXS2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 AC099654.7-201ENST00000635788 2127 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 GDI2P1-201ENST00000429312 1336 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 ANKRD36P1-201ENST00000344424 659 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 NACA3P-201ENST00000359690 648 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 RNU6-298P-201ENST00000390888 96 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 AL450338.1-201ENST00000407987 512 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 RNU2-25P-201ENST00000411041 191 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 AL592148.1-201ENST00000413568 445 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 PTP4A1P7-201ENST00000423476 514 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 RPL7P44-201ENST00000424827 742 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 SEPT7P5-201ENST00000434048 306 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 AC112220.1-201ENST00000434628 355 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 GTF2IP7-202ENST00000436677 309 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 MTND2P19-201ENST00000449129 1012 ntBASIC3.01□□□□□ -1.93
CCDC65Q8IXS2 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms