Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 MTCO3P20-201ENST00000454926 688 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 AL359385.1-201ENST00000456509 365 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 UBDP1-202ENST00000457888 382 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 RN7SL860P-201ENST00000473738 223 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SHFQ7M4L6 RPS27AP13-201ENST00000498403 237 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SHFQ7M4L6 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SHFQ7M4L6 RN7SKP244-201ENST00000516513 307 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 OR5G4P-201ENST00000525251 760 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 MED28P5-201ENST00000528254 438 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 DEFB108A-201ENST00000530110 222 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 AC006960.3-201ENST00000561845 705 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 AC090616.5-202ENST00000582111 297 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 AC006254.3-201ENST00000603353 884 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 AC245014.2-201ENST00000603689 287 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 AC246785.4-201ENST00000605374 287 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 AC126118.1-201ENST00000607744 628 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 AF250324.2-201ENST00000608299 610 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 AC007684.1-201ENST00000609671 477 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 AL133173.2-201ENST00000614270 90 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 AC114781.5-201ENST00000615297 108 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 AP000346.3-201ENST00000622821 210 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 AC091905.1-201ENST00000624400 311 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 OR5H6-203ENST00000642105 978 ntBASIC3.53□□□□□ -1.84
SHFQ7M4L6 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHFQ7M4L6 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.53□□□□□ -1.84
SHFQ7M4L6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHFQ7M4L6 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SHFQ7M4L6 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
SHFQ7M4L6 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHFQ7M4L6 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 AL136964.1-201ENST00000622038 2990 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHFQ7M4L6 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHFQ7M4L6 RNA5SP399-201ENST00000364003 117 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 RNU5A-8P-201ENST00000364102 114 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 Y_RNA.296-201ENST00000364930 108 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHFQ7M4L6 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 RNU6-629P-201ENST00000384061 103 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHFQ7M4L6 GSTA9P-201ENST00000406231 611 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 HSPE1P8-201ENST00000406997 288 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 BEND7P1-201ENST00000422058 457 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 AC007283.2-201ENST00000424739 197 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 AC016712.1-201ENST00000431088 378 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHFQ7M4L6 AL451074.3-201ENST00000437709 472 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 RPS11P1-201ENST00000451072 473 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 ANP32BP2-201ENST00000454525 545 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 TRBV12-2-201ENST00000489763 344 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 AC091167.1-201ENST00000492017 396 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 Vault.3-201ENST00000516676 95 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 MTND4LP26-201ENST00000518144 282 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SHFQ7M4L6 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 AC087883.1-201ENST00000551882 391 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 AP001094.1-201ENST00000579805 193 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 COX6CP3-201ENST00000580869 223 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 MTATP6P3-201ENST00000581686 676 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 MIR5096-201ENST00000583713 70 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.52□□□□□ -1.85
SHFQ7M4L6 AC007038.2-201ENST00000608095 740 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 AL590282.1-201ENST00000610379 1136 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 TUG1_1.1-201ENST00000610654 145 ntBASIC3.52□□□□□ -1.85
SHFQ7M4L6 SEPT14P19-203ENST00000633205 211 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms