Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SNORA26.7-201ENST00000391288 122 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.31□□□□□ -2.2
VPS13CQ709C8 RN7SL274P-201ENST00000492268 272 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 AC090255.1-201ENST00000495779 349 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.31□□□□□ -2.2
VPS13CQ709C8 HMGN1P28-201ENST00000521340 364 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC1.31□□□□□ -2.2
VPS13CQ709C8 AP000907.2-201ENST00000530827 353 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 AL137100.2-201ENST00000555786 315 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 U73479.1-201ENST00000618062 168 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 AL512283.1-201ENST00000606756 1384 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
VPS13CQ709C8 RNU6-37P-201ENST00000362692 107 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 RNU6-11P-201ENST00000364234 107 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 MTND1P18-201ENST00000448191 573 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 AC027673.1-201ENST00000456245 405 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 AC008571.1-201ENST00000467232 300 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.31□□□□□ -2.2
VPS13CQ709C8 RNU6-826P-201ENST00000516827 104 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.31□□□□□ -2.2
VPS13CQ709C8 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 AC002546.1-201ENST00000588041 2504 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 HMGB3P2-201ENST00000411913 584 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.31□□□□□ -2.2
VPS13CQ709C8 AL645568.3-201ENST00000433683 316 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 HMGN2P18-201ENST00000450680 270 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 AC021382.1-201ENST00000483523 359 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.31□□□□□ -2.2
VPS13CQ709C8 MIR4448-201ENST00000584360 86 ntBASIC1.31□□□□□ -2.2
VPS13CQ709C8 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC1.31□□□□□ -2.2
VPS13CQ709C8 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.31□□□□□ -2.2
VPS13CQ709C8 AC006026.1-201ENST00000444025 1803 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
VPS13CQ709C8 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
VPS13CQ709C8 RNA5SP457-201ENST00000363657 124 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 SNORD114-27-201ENST00000363766 70 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 EIF2S2P4-201ENST00000461070 984 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 AL049830.2-201ENST00000480072 201 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 AC084851.1-201ENST00000529105 249 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 AC090751.1-201ENST00000566966 267 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.3□□□□□ -2.2
VPS13CQ709C8 MIR3670-2-201ENST00000582974 65 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 MIR3670-1-201ENST00000584160 65 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 MIR3670-3-201ENST00000584855 65 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 MIR3670-4-201ENST00000612260 65 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 SEPT7P7-201ENST00000420492 1301 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.3□□□□□ -2.2
VPS13CQ709C8 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.3□□□□□ -2.2
VPS13CQ709C8 AL021368.2-201ENST00000606125 5352 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
VPS13CQ709C8 RNA5SP181-201ENST00000410246 98 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 AC109446.2-201ENST00000567872 497 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 MIR98-201ENST00000606724 119 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
VPS13CQ709C8 AC093010.3-201ENST00000570269 15214 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 RNA5SP138-201ENST00000365098 114 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 MIR520E-201ENST00000384867 87 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.3□□□□□ -2.2
VPS13CQ709C8 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.3□□□□□ -2.2
VPS13CQ709C8 AC091544.1-201ENST00000484702 348 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 SNORA70.14-201ENST00000516205 110 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.3□□□□□ -2.2
VPS13CQ709C8 MIR4419B-201ENST00000577260 68 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
VPS13CQ709C8 7SK.7-201ENST00000603504 247 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
VPS13CQ709C8 AC073348.1-201ENST00000623002 331 ntBASIC1.3□□□□□ -2.2
VPS13CQ709C8 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
VPS13CQ709C8 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
VPS13CQ709C8 RNU1-93P-201ENST00000364704 169 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 DEFB109C-201ENST00000382575 264 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 DEFB109B-201ENST00000382656 264 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 MIR1323-201ENST00000408090 73 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 AC090774.1-201ENST00000435925 246 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 AL589765.3-201ENST00000446084 462 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS13CQ709C8 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS13CQ709C8 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS13CQ709C8 MIR4506-201ENST00000584693 77 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 AC092954.1-201ENST00000609121 445 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 RMST_6.1-201ENST00000611980 203 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
VPS13CQ709C8 RNA5SP27-201ENST00000363839 119 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 AC017078.1-201ENST00000416146 368 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.29□□□□□ -2.2
VPS13CQ709C8 AC005517.2-201ENST00000424673 553 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 AL138785.1-201ENST00000425821 331 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 HMGB1P45-201ENST00000435986 653 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 AF186190.1-201ENST00000517470 480 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.29□□□□□ -2.2
VPS13CQ709C8 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.29□□□□□ -2.2
VPS13CQ709C8 MTCO1P14-201ENST00000441695 1559 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS13CQ709C8 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC1.29□□□□□ -2.2
VPS13CQ709C8 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
VPS13CQ709C8 HAR1A.1-201ENST00000459583 118 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 AC079203.1-201ENST00000487972 404 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 MTCYBP18-201ENST00000501056 747 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 AF131216.2-201ENST00000512316 564 ntBASIC1.29□□□□□ -2.2
VPS13CQ709C8 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms