Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 MIR372-201ENST00000362225 67 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 RNU6-270P-201ENST00000364131 105 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 RNU6-1035P-201ENST00000384477 107 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 RNU6-754P-201ENST00000391166 107 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 RNA5SP354-201ENST00000391247 136 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 RPL21P17-201ENST00000397467 475 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 MIR1289-1-201ENST00000408836 144 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 AL359704.1-201ENST00000411586 781 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 Z85995.1-201ENST00000415547 335 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 AC091390.3-201ENST00000426478 338 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 SAR1AP4-201ENST00000429225 591 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 SETP8-201ENST00000435341 628 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 AC129850.1-201ENST00000436203 508 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 CBWD4P-201ENST00000445695 655 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 AL162389.1-201ENST00000449233 177 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 RSL24D1P3-201ENST00000449255 495 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 AC010468.1-201ENST00000461022 817 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 KC877373.1-201ENST00000479066 408 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 FTH1P21-201ENST00000512179 511 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 RNA5SP291-201ENST00000517222 105 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 PAICSP4-201ENST00000517543 1253 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 HMGB1P14-201ENST00000557424 591 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 AC034105.4-201ENST00000568304 277 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 MIR4738-201ENST00000579134 87 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 DUXAP4-201ENST00000603046 613 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 U73023.1-201ENST00000603134 700 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 AP002782.1-201ENST00000623107 614 ntBASIC3.24□□□□□ -1.89
C11orf88Q6PI97 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 AP003122.5-201ENST00000527668 3766 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 RPL21P132-201ENST00000331267 462 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 RNU6-253P-201ENST00000384730 105 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 MIR200C-201ENST00000384980 68 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 PTMAP2-201ENST00000397627 327 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 AL590084.2-201ENST00000401481 382 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 AC099548.1-201ENST00000421443 426 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 RPL31P12-201ENST00000422587 358 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 AL691449.1-201ENST00000426570 421 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 AC104332.2-201ENST00000429959 156 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 AL591503.2-201ENST00000442314 1005 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 RPS4XP22-201ENST00000480755 780 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 AC106872.3-201ENST00000495104 446 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 OR5BM1P-201ENST00000512021 366 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 RNA5SP164-201ENST00000516533 110 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 RNU6-1282P-201ENST00000516735 96 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 RNU6-56P-201ENST00000516986 93 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 AC013828.2-201ENST00000532487 235 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 CYCSP30-201ENST00000546447 172 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 GTF2IP22-201ENST00000554443 182 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 MIR5685-201ENST00000579080 79 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 BNIP3P22-201ENST00000593399 556 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 AC015726.1-201ENST00000602353 681 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 SDR42E1P2-201ENST00000614861 481 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
C11orf88Q6PI97 AL356863.1-201ENST00000623378 1080 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 AC068787.1-201ENST00000623908 691 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 AC110079.1-202ENST00000635213 138 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 AC092125.1-201ENST00000562568 1995 ntBASIC3.23□□□□□ -1.89
C11orf88Q6PI97 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms