Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 ADAM24P-201ENST00000398655 2101 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 RNU6-853P-201ENST00000364306 107 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 RNU6-606P-201ENST00000384721 111 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 MTCYBP4-201ENST00000401524 249 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 EIF4A1P3-201ENST00000411521 244 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 RPL36P19-201ENST00000430744 301 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 AL591212.2-201ENST00000433923 257 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 GMFBP1-201ENST00000467831 427 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 AC006512.1-201ENST00000468816 291 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 AP000893.1-201ENST00000474462 794 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 AP001025.2-201ENST00000490908 477 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 AC023424.1-201ENST00000496058 459 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 SMURF2P1-201ENST00000514992 481 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 RPL7P20-201ENST00000520308 745 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 ZNF705CP-201ENST00000530515 889 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 OR5B10P-201ENST00000532869 642 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 MIR4429-201ENST00000580105 73 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 AC006130.2-201ENST00000586202 326 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 BBIP1P1-201ENST00000602999 279 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 MIR8059-201ENST00000620427 81 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 AC138965.3-201ENST00000623875 498 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 AC140479.6-201ENST00000633535 357 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 ELL2P4-201ENST00000446870 1376 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 AP004289.2-201ENST00000444413 1457 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 AP001350.1-201ENST00000601906 1524 ntBASIC4.87□□□□□ -1.63
CNKSR3Q6P9H4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 MIR331-201ENST00000362302 94 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 Y_RNA.100-201ENST00000363141 102 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 Y_RNA.187-201ENST00000363918 113 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 RNY1P12-201ENST00000364251 105 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 SNORA11F-201ENST00000408237 128 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 RNU6-193P-201ENST00000410977 107 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 AC079809.1-201ENST00000415468 276 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 DDX3P2-201ENST00000446138 111 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 HMGB3P22-202ENST00000451823 572 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 snoU13.7-201ENST00000459220 104 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 MTATP8P1-201ENST00000467115 207 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 AC010301.1-201ENST00000473936 355 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 AC034222.1-201ENST00000494052 532 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 HSPD1P15-201ENST00000505573 1122 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 AC004062.1-201ENST00000509926 645 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 RNU4-29P-201ENST00000515943 174 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 RNA5SP337-201ENST00000517007 109 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 RNU6-988P-201ENST00000519081 107 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 PTP4A1P6-201ENST00000531034 478 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 AC009852.2-201ENST00000567898 485 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 AL356432.3-201ENST00000568952 465 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 CYCSP40-201ENST00000575927 294 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 HSPE1P14-201ENST00000605812 302 ntBASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNKSR3Q6P9H4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms