Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC099489.2-201ENST00000574976 260 ntBASIC4.06□□□□□ -1.76
CCDC38Q502W7 MIR3146-201ENST00000580367 79 ntBASIC4.06□□□□□ -1.76
CCDC38Q502W7 AC105224.1-201ENST00000587055 421 ntBASIC4.06□□□□□ -1.76
CCDC38Q502W7 AP001029.3-201ENST00000588063 596 ntBASIC4.06□□□□□ -1.76
CCDC38Q502W7 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.06□□□□□ -1.76
CCDC38Q502W7 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC38Q502W7 KC877982.1-201ENST00000602313 470 ntBASIC4.06□□□□□ -1.76
CCDC38Q502W7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC38Q502W7 RN7SKP299-201ENST00000606679 301 ntBASIC4.06□□□□□ -1.76
CCDC38Q502W7 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC38Q502W7 RNVU1-4-201ENST00000612985 164 ntBASIC4.06□□□□□ -1.76
CCDC38Q502W7 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC38Q502W7 AC099654.13-201ENST00000639774 207 ntBASIC4.06□□□□□ -1.76
CCDC38Q502W7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC38Q502W7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC38Q502W7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC38Q502W7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
CCDC38Q502W7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
CCDC38Q502W7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC38Q502W7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC38Q502W7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC38Q502W7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC38Q502W7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC38Q502W7 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 Y_RNA.51-201ENST00000362725 102 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 Y_RNA.553-201ENST00000384670 102 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 RNU6-278P-201ENST00000390945 109 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 RSL24D1P6-201ENST00000426934 401 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 TIMM9P1-201ENST00000436122 256 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 HMGB1P37-201ENST00000439613 609 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 RPL21P89-201ENST00000444021 467 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 AL033528.1-201ENST00000453780 140 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 snoU109.1-201ENST00000459339 135 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 SNORD42A-201ENST00000459584 64 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 AC103987.1-201ENST00000473394 348 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 ACTR3P3-201ENST00000480448 893 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 RPS15AP36-201ENST00000492022 382 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 CBX3P3-201ENST00000508108 532 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 AC109464.2-201ENST00000510242 943 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 RPL21P5-201ENST00000554662 472 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 MIR3921-201ENST00000577308 85 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 AC009977.1-201ENST00000586015 570 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 AC006116.10-201ENST00000591836 581 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 AC119751.7-201ENST00000600494 245 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 AL590392.1-201ENST00000604960 446 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 AC103710.3-201ENST00000608157 948 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 AP002826.1-201ENST00000608835 315 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 AC108747.1-201ENST00000609508 535 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 BX664608.1-201ENST00000610519 487 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 MIR6868-201ENST00000611215 58 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 AC245517.5-201ENST00000611529 162 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 MIR7153-201ENST00000637758 57 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 OR52H1-202ENST00000641796 1061 ntBASIC4.05□□□□□ -1.76
CCDC38Q502W7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC38Q502W7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC38Q502W7 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CCDC38Q502W7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC38Q502W7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC38Q502W7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC38Q502W7 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC38Q502W7 Y_RNA.201-201ENST00000364052 96 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 RNA5SP130-201ENST00000364431 114 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 SNORA23-201ENST00000365128 182 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 SNORA40.3-201ENST00000390964 122 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 RN7SKP285-201ENST00000410137 318 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 UBE2FP1-201ENST00000416536 447 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 RPL27AP8-201ENST00000424277 446 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC38Q502W7 AC010153.1-201ENST00000432862 727 ntBASIC4.04□□□□□ -1.76
CCDC38Q502W7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms