Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 PPIAP31-201ENST00000405422 495 ntBASIC4.56□□□□□ -1.68
LONRF3Q496Y0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.56□□□□□ -1.68
LONRF3Q496Y0 AC108032.1-201ENST00000416706 207 ntBASIC4.56□□□□□ -1.68
LONRF3Q496Y0 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.56□□□□□ -1.68
LONRF3Q496Y0 BEND7P1-201ENST00000422058 457 ntBASIC4.56□□□□□ -1.68
LONRF3Q496Y0 DUTP6-201ENST00000425573 462 ntBASIC4.56□□□□□ -1.68
LONRF3Q496Y0 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 AC244505.5-201ENST00000443639 207 ntBASIC4.56□□□□□ -1.68
LONRF3Q496Y0 RPL21P89-201ENST00000444021 467 ntBASIC4.56□□□□□ -1.68
LONRF3Q496Y0 RAC1P7-201ENST00000445367 377 ntBASIC4.56□□□□□ -1.68
LONRF3Q496Y0 AL590365.1-201ENST00000450788 243 ntBASIC4.56□□□□□ -1.68
LONRF3Q496Y0 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 AP001025.2-201ENST00000490908 477 ntBASIC4.56□□□□□ -1.68
LONRF3Q496Y0 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 RNU6-714P-201ENST00000516963 103 ntBASIC4.56□□□□□ -1.68
LONRF3Q496Y0 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 AC074050.1-201ENST00000563247 211 ntBASIC4.56□□□□□ -1.68
LONRF3Q496Y0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 MIR5684-201ENST00000585074 65 ntBASIC4.56□□□□□ -1.68
LONRF3Q496Y0 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 AC244505.7-201ENST00000599675 272 ntBASIC4.56□□□□□ -1.68
LONRF3Q496Y0 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 U6atac.1-201ENST00000616025 117 ntBASIC4.56□□□□□ -1.68
LONRF3Q496Y0 PLCE1P1-201ENST00000622094 305 ntBASIC4.56□□□□□ -1.68
LONRF3Q496Y0 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.56□□□□□ -1.68
LONRF3Q496Y0 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.56□□□□□ -1.68
LONRF3Q496Y0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LONRF3Q496Y0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.55□□□□□ -1.68
LONRF3Q496Y0 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.55□□□□□ -1.68
LONRF3Q496Y0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
LONRF3Q496Y0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.55□□□□□ -1.68
LONRF3Q496Y0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.55□□□□□ -1.68
LONRF3Q496Y0 MIR591-201ENST00000385290 95 ntBASIC4.55□□□□□ -1.68
LONRF3Q496Y0 RNU4-6P-201ENST00000410804 122 ntBASIC4.55□□□□□ -1.68
LONRF3Q496Y0 HMGB3P23-201ENST00000414981 585 ntBASIC4.55□□□□□ -1.68
LONRF3Q496Y0 SSXP9-201ENST00000417503 292 ntBASIC4.55□□□□□ -1.68
LONRF3Q496Y0 Z97055.1-201ENST00000419730 712 ntBASIC4.55□□□□□ -1.68
LONRF3Q496Y0 MTCYBP5-201ENST00000423752 1135 ntBASIC4.55□□□□□ -1.68
LONRF3Q496Y0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.55□□□□□ -1.68
LONRF3Q496Y0 RSU1P2-202ENST00000437884 485 ntBASIC4.55□□□□□ -1.68
LONRF3Q496Y0 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.55□□□□□ -1.68
LONRF3Q496Y0 NANOGNBP1-201ENST00000448444 480 ntBASIC4.55□□□□□ -1.68
LONRF3Q496Y0 HMGB1P36-201ENST00000487709 576 ntBASIC4.55□□□□□ -1.68
LONRF3Q496Y0 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.55□□□□□ -1.68
LONRF3Q496Y0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.55□□□□□ -1.68
LONRF3Q496Y0 AC105914.1-201ENST00000511798 226 ntBASIC4.55□□□□□ -1.68
LONRF3Q496Y0 RNU1-45P-201ENST00000517191 141 ntBASIC4.55□□□□□ -1.68
LONRF3Q496Y0 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.55□□□□□ -1.68
LONRF3Q496Y0 AC022878.1-201ENST00000530684 149 ntBASIC4.55□□□□□ -1.68
LONRF3Q496Y0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.55□□□□□ -1.68
LONRF3Q496Y0 AC087883.1-201ENST00000551882 391 ntBASIC4.55□□□□□ -1.68
LONRF3Q496Y0 GNRHR2P1-201ENST00000555315 631 ntBASIC4.55□□□□□ -1.68
LONRF3Q496Y0 MIR4801-201ENST00000582704 82 ntBASIC4.55□□□□□ -1.68
LONRF3Q496Y0 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.55□□□□□ -1.68
LONRF3Q496Y0 AC112191.3-201ENST00000604371 277 ntBASIC4.55□□□□□ -1.68
LONRF3Q496Y0 AC128687.2-201ENST00000609657 566 ntBASIC4.55□□□□□ -1.68
LONRF3Q496Y0 AC068944.2-201ENST00000610373 403 ntBASIC4.55□□□□□ -1.68
LONRF3Q496Y0 AC008250.2-201ENST00000615261 205 ntBASIC4.55□□□□□ -1.68
LONRF3Q496Y0 MIR8058-201ENST00000615737 89 ntBASIC4.55□□□□□ -1.68
LONRF3Q496Y0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.55□□□□□ -1.68
LONRF3Q496Y0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LONRF3Q496Y0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
LONRF3Q496Y0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LONRF3Q496Y0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LONRF3Q496Y0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
LONRF3Q496Y0 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LONRF3Q496Y0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LONRF3Q496Y0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
LONRF3Q496Y0 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LONRF3Q496Y0 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LONRF3Q496Y0 FRG1BP-201ENST00000278882 761 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 RNU6-744P-201ENST00000365557 107 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 U1.1-201ENST00000384101 164 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 RNU6-1316P-201ENST00000384242 108 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 CCDC58P2-201ENST00000417131 366 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.54□□□□□ -1.68
LONRF3Q496Y0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.54□□□□□ -1.68
LONRF3Q496Y0 HMGN2P20-201ENST00000437531 273 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 RPS4XP4-201ENST00000443195 763 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LONRF3Q496Y0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.54□□□□□ -1.68
LONRF3Q496Y0 MTCO1P42-201ENST00000457379 726 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 snoU109.1-201ENST00000459339 135 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 RN7SL132P-201ENST00000478131 296 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 RPL7P24-201ENST00000493052 752 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 RPL29P14-201ENST00000495837 428 ntBASIC4.54□□□□□ -1.68
LONRF3Q496Y0 NIPA2P2-201ENST00000496376 1083 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms