Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 RPL23AP45-201ENST00000476406 468 ntBASIC3.43□□□□□ -1.86
PTCH1Q13635 RPL23AP70-201ENST00000483361 460 ntBASIC3.43□□□□□ -1.86
PTCH1Q13635 RPL9P33-201ENST00000484311 566 ntBASIC3.43□□□□□ -1.86
PTCH1Q13635 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.43□□□□□ -1.86
PTCH1Q13635 AC118282.2-201ENST00000508739 374 ntBASIC3.43□□□□□ -1.86
PTCH1Q13635 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTCH1Q13635 RNA5SP468-201ENST00000516782 93 ntBASIC3.43□□□□□ -1.86
PTCH1Q13635 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.43□□□□□ -1.86
PTCH1Q13635 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.43□□□□□ -1.86
PTCH1Q13635 AC093510.2-201ENST00000562820 896 ntBASIC3.43□□□□□ -1.86
PTCH1Q13635 RPL23AP84-201ENST00000571193 464 ntBASIC3.43□□□□□ -1.86
PTCH1Q13635 AC068313.1-201ENST00000604028 1008 ntBASIC3.43□□□□□ -1.86
PTCH1Q13635 AL136370.1-201ENST00000608166 691 ntBASIC3.43□□□□□ -1.86
PTCH1Q13635 AL133445.2-201ENST00000611191 527 ntBASIC3.43□□□□□ -1.86
PTCH1Q13635 AC073968.1-201ENST00000618594 637 ntBASIC3.43□□□□□ -1.86
PTCH1Q13635 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PTCH1Q13635 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.43□□□□□ -1.86
PTCH1Q13635 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.42□□□□□ -1.86
PTCH1Q13635 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.42□□□□□ -1.86
PTCH1Q13635 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PTCH1Q13635 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTCH1Q13635 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.42□□□□□ -1.86
PTCH1Q13635 AL161781.1-201ENST00000354277 403 ntBASIC3.42□□□□□ -1.86
PTCH1Q13635 RNU6-115P-201ENST00000364310 107 ntBASIC3.42□□□□□ -1.86
PTCH1Q13635 DEFB109C-201ENST00000382575 264 ntBASIC3.42□□□□□ -1.86
PTCH1Q13635 DEFB109B-201ENST00000382656 264 ntBASIC3.42□□□□□ -1.86
PTCH1Q13635 U6.112-201ENST00000384129 70 ntBASIC3.42□□□□□ -1.86
PTCH1Q13635 MTCO2P31-201ENST00000402702 684 ntBASIC3.42□□□□□ -1.86
PTCH1Q13635 USP9YP19-201ENST00000412165 485 ntBASIC3.42□□□□□ -1.86
PTCH1Q13635 AC093151.1-201ENST00000427711 313 ntBASIC3.42□□□□□ -1.86
PTCH1Q13635 NEK4P1-201ENST00000433383 879 ntBASIC3.42□□□□□ -1.86
PTCH1Q13635 AL590762.3-201ENST00000436372 640 ntBASIC3.42□□□□□ -1.86
PTCH1Q13635 GAPDHP27-201ENST00000447427 1020 ntBASIC3.42□□□□□ -1.86
PTCH1Q13635 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.42□□□□□ -1.86
PTCH1Q13635 RPL32P14-201ENST00000463196 378 ntBASIC3.42□□□□□ -1.86
PTCH1Q13635 AC103975.1-201ENST00000482506 483 ntBASIC3.42□□□□□ -1.86
PTCH1Q13635 AC008716.1-201ENST00000511084 513 ntBASIC3.42□□□□□ -1.86
PTCH1Q13635 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.42□□□□□ -1.86
PTCH1Q13635 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.42□□□□□ -1.86
PTCH1Q13635 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PTCH1Q13635 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.42□□□□□ -1.86
PTCH1Q13635 GAS5-AS1-201ENST00000602767 694 ntBASIC3.42□□□□□ -1.86
PTCH1Q13635 AC098483.2-201ENST00000603158 454 ntBASIC3.42□□□□□ -1.86
PTCH1Q13635 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTCH1Q13635 AC084035.1-201ENST00000634543 607 ntBASIC3.42□□□□□ -1.86
PTCH1Q13635 MTND2P41-201ENST00000637599 773 ntBASIC3.42□□□□□ -1.86
PTCH1Q13635 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PTCH1Q13635 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.41□□□□□ -1.86
PTCH1Q13635 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PTCH1Q13635 AC104454.1-201ENST00000421341 1401 ntBASIC3.41□□□□□ -1.86
PTCH1Q13635 MIR591-201ENST00000385290 95 ntBASIC3.41□□□□□ -1.86
PTCH1Q13635 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PTCH1Q13635 AL024474.1-201ENST00000404655 591 ntBASIC3.41□□□□□ -1.86
PTCH1Q13635 SNORD88.1-201ENST00000408684 91 ntBASIC3.41□□□□□ -1.86
PTCH1Q13635 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PTCH1Q13635 MTATP6P11-201ENST00000428071 670 ntBASIC3.41□□□□□ -1.86
PTCH1Q13635 ST13P20-201ENST00000447996 1065 ntBASIC3.41□□□□□ -1.86
PTCH1Q13635 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.41□□□□□ -1.86
PTCH1Q13635 TRBV26-201ENST00000456572 344 ntBASIC3.41□□□□□ -1.86
PTCH1Q13635 snoU13.4-201ENST00000458916 104 ntBASIC3.41□□□□□ -1.86
PTCH1Q13635 HMGB1P25-201ENST00000468402 607 ntBASIC3.41□□□□□ -1.86
PTCH1Q13635 AC010301.1-201ENST00000473936 355 ntBASIC3.41□□□□□ -1.86
PTCH1Q13635 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.41□□□□□ -1.86
PTCH1Q13635 AC109471.1-201ENST00000511631 612 ntBASIC3.41□□□□□ -1.86
PTCH1Q13635 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.41□□□□□ -1.86
PTCH1Q13635 RNU1-61P-201ENST00000516107 151 ntBASIC3.41□□□□□ -1.86
PTCH1Q13635 ZNF705CP-201ENST00000530515 889 ntBASIC3.41□□□□□ -1.86
PTCH1Q13635 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.41□□□□□ -1.86
PTCH1Q13635 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PTCH1Q13635 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.41□□□□□ -1.86
PTCH1Q13635 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.41□□□□□ -1.86
PTCH1Q13635 MTCO1P40-201ENST00000574371 625 ntBASIC3.41□□□□□ -1.86
PTCH1Q13635 MIR4789-201ENST00000577469 82 ntBASIC3.41□□□□□ -1.86
PTCH1Q13635 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PTCH1Q13635 AC128687.1-201ENST00000605304 619 ntBASIC3.41□□□□□ -1.86
PTCH1Q13635 AC097372.4-201ENST00000625025 466 ntBASIC3.41□□□□□ -1.86
PTCH1Q13635 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PTCH1Q13635 MTND5P6-201ENST00000422338 1798 ntBASIC3.41□□□□□ -1.86
PTCH1Q13635 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PTCH1Q13635 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.4□□□□□ -1.86
PTCH1Q13635 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.4□□□□□ -1.86
PTCH1Q13635 AC130650.2-201ENST00000618736 2403 ntBASIC3.4□□□□□ -1.86
PTCH1Q13635 RNU6-619P-201ENST00000365146 108 ntBASIC3.4□□□□□ -1.87
PTCH1Q13635 Y_RNA.338-201ENST00000365320 114 ntBASIC3.4□□□□□ -1.87
PTCH1Q13635 RNU6-821P-201ENST00000390995 107 ntBASIC3.4□□□□□ -1.87
PTCH1Q13635 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.4□□□□□ -1.87
PTCH1Q13635 USP9YP20-201ENST00000419224 558 ntBASIC3.4□□□□□ -1.87
PTCH1Q13635 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.4□□□□□ -1.87
PTCH1Q13635 AL035410.1-201ENST00000427409 427 ntBASIC3.4□□□□□ -1.87
PTCH1Q13635 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.4□□□□□ -1.87
PTCH1Q13635 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.4□□□□□ -1.87
PTCH1Q13635 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.4□□□□□ -1.87
PTCH1Q13635 RPL23AP16-201ENST00000441715 421 ntBASIC3.4□□□□□ -1.87
PTCH1Q13635 AL050341.1-201ENST00000447743 313 ntBASIC3.4□□□□□ -1.87
PTCH1Q13635 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.4□□□□□ -1.87
PTCH1Q13635 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.4□□□□□ -1.87
PTCH1Q13635 AC048346.1-201ENST00000510247 144 ntBASIC3.4□□□□□ -1.87
PTCH1Q13635 SNORA31.1-201ENST00000515993 133 ntBASIC3.4□□□□□ -1.87
PTCH1Q13635 SNORA31.5-201ENST00000516190 133 ntBASIC3.4□□□□□ -1.87
PTCH1Q13635 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 150.2 ms