Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PCDH1Q08174 EIF2AP4-201ENST00000424793 1781 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDH1Q08174 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDH1Q08174 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDH1Q08174 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDH1Q08174 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PCDH1Q08174 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PCDH1Q08174 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDH1Q08174 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDH1Q08174 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDH1Q08174 RNU6-450P-201ENST00000364654 107 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 RNA5SP132-201ENST00000364725 118 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 AC110754.1-201ENST00000399740 601 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 RNU2-23P-201ENST00000410545 195 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDH1Q08174 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDH1Q08174 RPL12P34-201ENST00000424532 479 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 PSMA2P3-201ENST00000429685 675 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDH1Q08174 RHOT1P3-201ENST00000436571 331 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 RPS11P7-201ENST00000442125 465 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 NOTCH2P1-201ENST00000443481 624 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 RNU6-352P-201ENST00000516908 107 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 RNU6-677P-201ENST00000516914 101 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 RNU6-388P-201ENST00000517012 105 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 RNU6-389P-201ENST00000517048 105 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDH1Q08174 AP003385.6-201ENST00000531603 374 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 AC091516.1-201ENST00000549191 703 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDH1Q08174 AC104763.2-201ENST00000604179 382 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 AC011626.1-201ENST00000604710 562 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 AC007619.2-201ENST00000605743 379 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDH1Q08174 AC062037.2-201ENST00000610137 73 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 AC107871.2-201ENST00000612894 502 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 HMGB1P24-202ENST00000615653 685 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDH1Q08174 MIR4496-201ENST00000635896 61 ntBASIC5.11□□□□□ -1.59
PCDH1Q08174 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDH1Q08174 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDH1Q08174 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDH1Q08174 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
PCDH1Q08174 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDH1Q08174 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDH1Q08174 Z95331.1-201ENST00000623075 23112 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
PCDH1Q08174 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDH1Q08174 Y_RNA.307-201ENST00000365022 117 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 MIR589-201ENST00000385238 99 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PCDH1Q08174 RNU6-823P-201ENST00000391042 103 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 U3.25-201ENST00000391209 220 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 RNA5SP56-201ENST00000410277 118 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 RNU6-55P-201ENST00000411092 107 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 AC092809.3-201ENST00000415453 231 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 AC093655.2-201ENST00000425735 631 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDH1Q08174 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDH1Q08174 AC097713.2-201ENST00000430199 356 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 AC009238.2-201ENST00000431026 355 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 ELOCP18-201ENST00000434209 337 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDH1Q08174 AL133445.1-201ENST00000467051 452 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 AC084198.1-201ENST00000477747 402 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDH1Q08174 DEFB109F-201ENST00000491870 277 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 RPL22P13-201ENST00000493291 347 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDH1Q08174 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDH1Q08174 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDH1Q08174 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDH1Q08174 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDH1Q08174 AC005357.1-201ENST00000588399 301 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 AC067852.3-201ENST00000589177 561 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDH1Q08174 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDH1Q08174 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDH1Q08174 AC074101.1-201ENST00000637861 241 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PCDH1Q08174 MUC2-202ENST00000613187 4845 ntBASIC5.1□□□□□ -1.59
PCDH1Q08174 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PCDH1Q08174 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDH1Q08174 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDH1Q08174 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.09□□□□□ -1.59
PCDH1Q08174 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDH1Q08174 SAGE2P-201ENST00000420011 2126 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.09□□□□□ -1.59
PCDH1Q08174 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.09□□□□□ -1.59
PCDH1Q08174 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
PCDH1Q08174 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PCDH1Q08174 AC073136.1-201ENST00000449426 2884 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
PCDH1Q08174 Y_RNA.39-201ENST00000362620 98 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 RNU6-1059P-201ENST00000363752 98 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 Y_RNA.257-201ENST00000364596 102 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 SNORA23-201ENST00000365128 182 ntBASIC5.09□□□□□ -1.59
PCDH1Q08174 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms