Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 MIR502-201ENST00000606349 86 ntBASIC2.15□□□□□ -2.07
SCN7AQ01118 AC090425.2-201ENST00000608818 501 ntBASIC2.15□□□□□ -2.07
SCN7AQ01118 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SCN7AQ01118 AC026241.1-201ENST00000517873 2142 ntBASIC2.14□□□□□ -2.07
SCN7AQ01118 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SCN7AQ01118 RNA5SP27-201ENST00000363839 119 ntBASIC2.14□□□□□ -2.07
SCN7AQ01118 HMGB3P2-201ENST00000411913 584 ntBASIC2.14□□□□□ -2.07
SCN7AQ01118 MTND2P16-201ENST00000419987 799 ntBASIC2.14□□□□□ -2.07
SCN7AQ01118 RPL23AP58-201ENST00000440453 469 ntBASIC2.14□□□□□ -2.07
SCN7AQ01118 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.14□□□□□ -2.07
SCN7AQ01118 AC090515.1-201ENST00000465295 476 ntBASIC2.14□□□□□ -2.07
SCN7AQ01118 AC010683.1-201ENST00000473673 378 ntBASIC2.14□□□□□ -2.07
SCN7AQ01118 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
SCN7AQ01118 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.14□□□□□ -2.07
SCN7AQ01118 RNU6-347P-201ENST00000516658 105 ntBASIC2.14□□□□□ -2.07
SCN7AQ01118 RNU1-40P-201ENST00000516816 164 ntBASIC2.14□□□□□ -2.07
SCN7AQ01118 RNU1-97P-201ENST00000516872 164 ntBASIC2.14□□□□□ -2.07
SCN7AQ01118 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.14□□□□□ -2.07
SCN7AQ01118 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.14□□□□□ -2.07
SCN7AQ01118 AP001542.2-201ENST00000593141 364 ntBASIC2.14□□□□□ -2.07
SCN7AQ01118 AL035411.2-201ENST00000604022 421 ntBASIC2.14□□□□□ -2.07
SCN7AQ01118 MTND4P23-201ENST00000447723 1363 ntBASIC2.14□□□□□ -2.07
SCN7AQ01118 Y_RNA.122-201ENST00000363331 96 ntBASIC2.13□□□□□ -2.07
SCN7AQ01118 RNA5SP105-201ENST00000391123 113 ntBASIC2.13□□□□□ -2.07
SCN7AQ01118 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.13□□□□□ -2.07
SCN7AQ01118 SSXP1-201ENST00000453640 473 ntBASIC2.13□□□□□ -2.07
SCN7AQ01118 AC117532.1-201ENST00000514638 323 ntBASIC2.13□□□□□ -2.07
SCN7AQ01118 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.13□□□□□ -2.07
SCN7AQ01118 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.13□□□□□ -2.07
SCN7AQ01118 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.13□□□□□ -2.07
SCN7AQ01118 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.13□□□□□ -2.07
SCN7AQ01118 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.12□□□□□ -2.07
SCN7AQ01118 TAS2R15P-201ENST00000390674 928 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 TRGV6-201ENST00000417928 299 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 NAP1L4P3-201ENST00000432820 1147 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 AL645568.3-201ENST00000433683 316 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.12□□□□□ -2.07
SCN7AQ01118 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.12□□□□□ -2.07
SCN7AQ01118 AC104308.1-201ENST00000454621 333 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 AMD1P1-201ENST00000457220 922 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SCN7AQ01118 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SCN7AQ01118 AC023050.1-201ENST00000498198 304 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.12□□□□□ -2.07
SCN7AQ01118 AC068714.1-201ENST00000559623 800 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 AC104581.2-201ENST00000572227 430 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 AL645939.4-201ENST00000604495 135 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 AC012150.2-201ENST00000621300 544 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SCN7AQ01118 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SCN7AQ01118 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.12□□□□□ -2.07
SCN7AQ01118 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SCN7AQ01118 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.12□□□□□ -2.07
SCN7AQ01118 RNU4-13P-201ENST00000364019 141 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 RNA5SP189-201ENST00000364920 115 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 RNU6-225P-201ENST00000384613 103 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SCN7AQ01118 RPS15AP12-201ENST00000419498 388 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 MTCO3P21-201ENST00000430791 643 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 TRIM60P18-201ENST00000441518 828 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 DPPA3P1-201ENST00000448050 469 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.12□□□□□ -2.07
SCN7AQ01118 RNU6-1218P-201ENST00000458990 108 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 ARL4AP2-201ENST00000507378 601 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 AC104115.2-201ENST00000523026 687 ntBASIC2.12□□□□□ -2.07
SCN7AQ01118 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.11□□□□□ -2.07
SCN7AQ01118 AC110774.1-201ENST00000623567 2018 ntBASIC2.11□□□□□ -2.07
SCN7AQ01118 AL121972.1-201ENST00000402023 252 ntBASIC2.11□□□□□ -2.07
SCN7AQ01118 RPS7P9-201ENST00000414704 586 ntBASIC2.11□□□□□ -2.07
SCN7AQ01118 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.11□□□□□ -2.07
SCN7AQ01118 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC2.11□□□□□ -2.07
SCN7AQ01118 SNRPFP4-201ENST00000456366 242 ntBASIC2.11□□□□□ -2.07
SCN7AQ01118 RPL21P39-201ENST00000463605 483 ntBASIC2.11□□□□□ -2.07
SCN7AQ01118 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.11□□□□□ -2.07
SCN7AQ01118 ARL2BPP2-201ENST00000550907 489 ntBASIC2.11□□□□□ -2.07
SCN7AQ01118 MIR4419B-201ENST00000577260 68 ntBASIC2.11□□□□□ -2.07
SCN7AQ01118 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.11□□□□□ -2.07
SCN7AQ01118 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.11□□□□□ -2.07
SCN7AQ01118 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.11□□□□□ -2.07
SCN7AQ01118 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
SCN7AQ01118 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.11□□□□□ -2.07
SCN7AQ01118 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.11□□□□□ -2.07
SCN7AQ01118 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SCN7AQ01118 SNORA16.1-201ENST00000364597 132 ntBASIC2.1□□□□□ -2.07
SCN7AQ01118 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.1□□□□□ -2.07
SCN7AQ01118 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.1□□□□□ -2.07
SCN7AQ01118 RPS15AP7-201ENST00000439294 405 ntBASIC2.1□□□□□ -2.07
SCN7AQ01118 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.1□□□□□ -2.07
SCN7AQ01118 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SCN7AQ01118 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.1□□□□□ -2.07
SCN7AQ01118 AC090255.1-201ENST00000495779 349 ntBASIC2.1□□□□□ -2.07
SCN7AQ01118 RNU6-943P-201ENST00000516960 98 ntBASIC2.1□□□□□ -2.07
SCN7AQ01118 RNA5SP490-201ENST00000517141 136 ntBASIC2.1□□□□□ -2.07
SCN7AQ01118 AC012360.2-201ENST00000609349 391 ntBASIC2.1□□□□□ -2.07
SCN7AQ01118 FO624990.1-201ENST00000636373 85 ntBASIC2.1□□□□□ -2.07
SCN7AQ01118 AC090897.3-201ENST00000636973 1157 ntBASIC2.1□□□□□ -2.07
SCN7AQ01118 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.1□□□□□ -2.07
SCN7AQ01118 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SCN7AQ01118 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms