Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CX3CL1P78423 AC116096.1-201ENST00000566804 2314 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.19□□□□□ -1.9
CX3CL1P78423 AC005832.2-201ENST00000538921 1430 ntBASIC3.19□□□□□ -1.9
CX3CL1P78423 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.18□□□□□ -1.9
CX3CL1P78423 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.18□□□□□ -1.9
CX3CL1P78423 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CX3CL1P78423 AC092326.2-201ENST00000624772 1561 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 GNG5P1-201ENST00000255500 204 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CX3CL1P78423 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CX3CL1P78423 RNU1-18P-201ENST00000363062 164 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 SNORA70.2-201ENST00000364506 135 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 SNORA23-201ENST00000365128 182 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 RNU6-1119P-201ENST00000384349 108 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 Y_RNA.559-201ENST00000384686 107 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 Z98941.1-201ENST00000407764 100 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 AC007899.1-201ENST00000412776 775 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.18□□□□□ -1.9
CX3CL1P78423 UBE2FP1-201ENST00000416536 447 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 AL356095.1-201ENST00000417217 199 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.18□□□□□ -1.9
CX3CL1P78423 AL589872.1-201ENST00000426602 288 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.18□□□□□ -1.9
CX3CL1P78423 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.18□□□□□ -1.9
CX3CL1P78423 AC244505.5-201ENST00000443639 207 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 AC114755.5-201ENST00000447760 831 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.18□□□□□ -1.9
CX3CL1P78423 AC108059.3-201ENST00000456388 214 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 CFTRP1-201ENST00000456646 183 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 TPTE2P5-203ENST00000458118 728 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 TPT1P7-201ENST00000458300 517 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 RPS15AP36-201ENST00000492022 382 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 NDUFB4P2-201ENST00000509515 391 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.18□□□□□ -1.9
CX3CL1P78423 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.18□□□□□ -1.9
CX3CL1P78423 Y_RNA.672-201ENST00000516289 104 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 RNU2-46P-201ENST00000517038 113 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 IGKV2D-19-201ENST00000523346 262 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.18□□□□□ -1.9
CX3CL1P78423 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.18□□□□□ -1.9
CX3CL1P78423 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.18□□□□□ -1.9
CX3CL1P78423 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.18□□□□□ -1.9
CX3CL1P78423 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.18□□□□□ -1.9
CX3CL1P78423 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.18□□□□□ -1.9
CX3CL1P78423 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.18□□□□□ -1.9
CX3CL1P78423 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.18□□□□□ -1.9
CX3CL1P78423 BDH2P1-201ENST00000602288 736 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 KC877982.1-201ENST00000602313 470 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 AL591034.3-201ENST00000605511 685 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.18□□□□□ -1.9
CX3CL1P78423 uc_338.12-201ENST00000616344 181 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 AC095031.1-201ENST00000623685 672 ntBASIC3.18□□□□□ -1.9
CX3CL1P78423 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.18□□□□□ -1.9
CX3CL1P78423 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.18□□□□□ -1.9
CX3CL1P78423 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
CX3CL1P78423 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CX3CL1P78423 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CX3CL1P78423 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CX3CL1P78423 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.18□□□□□ -1.9
CX3CL1P78423 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CX3CL1P78423 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CX3CL1P78423 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.17□□□□□ -1.9
CX3CL1P78423 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CX3CL1P78423 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.17□□□□□ -1.9
CX3CL1P78423 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.17□□□□□ -1.9
CX3CL1P78423 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
CX3CL1P78423 RNU6-223P-201ENST00000362830 107 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 U8.3-201ENST00000363321 132 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 RNU4-1-201ENST00000363925 141 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 RNU4-75P-201ENST00000364621 146 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CX3CL1P78423 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.17□□□□□ -1.9
CX3CL1P78423 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.17□□□□□ -1.9
CX3CL1P78423 RN7SKP159-201ENST00000410657 292 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.17□□□□□ -1.9
CX3CL1P78423 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.17□□□□□ -1.9
CX3CL1P78423 RSL24D1P6-201ENST00000426934 401 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 DLGAP5P1-201ENST00000430307 464 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.17□□□□□ -1.9
CX3CL1P78423 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.17□□□□□ -1.9
CX3CL1P78423 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.17□□□□□ -1.9
CX3CL1P78423 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.17□□□□□ -1.9
CX3CL1P78423 AC005094.1-201ENST00000440420 368 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CX3CL1P78423 ELOCP30-201ENST00000447108 299 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.17□□□□□ -1.9
CX3CL1P78423 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.17□□□□□ -1.9
CX3CL1P78423 MTCO3P20-201ENST00000454926 688 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 MTND1P12-201ENST00000455231 147 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 RPL9P32-201ENST00000464118 620 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 KLF3P2-201ENST00000465138 268 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.17□□□□□ -1.9
CX3CL1P78423 RN7SL385P-201ENST00000468873 276 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 AP001086.1-201ENST00000494882 321 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 AC091435.1-201ENST00000505442 584 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.17□□□□□ -1.9
CX3CL1P78423 SNORA18.6-201ENST00000516792 115 ntBASIC3.17□□□□□ -1.9
CX3CL1P78423 AC091516.1-201ENST00000549191 703 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms