Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC010374.2-201ENST00000512933 535 ntBASIC2.29□□□□□ -2.04
ACTBP60709 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.29□□□□□ -2.04
ACTBP60709 RNU6-1095P-201ENST00000516148 108 ntBASIC2.29□□□□□ -2.04
ACTBP60709 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
ACTBP60709 AC123904.3-201ENST00000547218 814 ntBASIC2.29□□□□□ -2.04
ACTBP60709 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.29□□□□□ -2.04
ACTBP60709 AC121758.2-201ENST00000553271 193 ntBASIC2.29□□□□□ -2.04
ACTBP60709 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.29□□□□□ -2.04
ACTBP60709 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
ACTBP60709 AMZ2P1-203ENST00000565833 850 ntBASIC2.29□□□□□ -2.04
ACTBP60709 HMGB1P6-201ENST00000569046 646 ntBASIC2.29□□□□□ -2.04
ACTBP60709 MTATP6P25-201ENST00000574491 261 ntBASIC2.29□□□□□ -2.04
ACTBP60709 MIR4635-201ENST00000583759 79 ntBASIC2.29□□□□□ -2.04
ACTBP60709 AC012669.1-201ENST00000603209 283 ntBASIC2.29□□□□□ -2.04
ACTBP60709 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
ACTBP60709 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
ACTBP60709 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ACTBP60709 ZNF271P-202ENST00000465539 1970 ntBASIC2.29□□□□□ -2.04
ACTBP60709 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ACTBP60709 AC109315.1-201ENST00000584143 1347 ntBASIC2.28□□□□□ -2.04
ACTBP60709 SNORA48.2-201ENST00000390926 124 ntBASIC2.28□□□□□ -2.04
ACTBP60709 AL356057.1-202ENST00000402263 756 ntBASIC2.28□□□□□ -2.04
ACTBP60709 RNA5SP181-201ENST00000410246 98 ntBASIC2.28□□□□□ -2.04
ACTBP60709 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.28□□□□□ -2.04
ACTBP60709 OR4K6P-201ENST00000416478 897 ntBASIC2.28□□□□□ -2.04
ACTBP60709 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.28□□□□□ -2.04
ACTBP60709 AC091390.3-201ENST00000426478 338 ntBASIC2.28□□□□□ -2.04
ACTBP60709 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ACTBP60709 MTND4LP7-201ENST00000431728 294 ntBASIC2.28□□□□□ -2.04
ACTBP60709 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.28□□□□□ -2.04
ACTBP60709 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.28□□□□□ -2.04
ACTBP60709 AC092170.1-201ENST00000440211 356 ntBASIC2.28□□□□□ -2.04
ACTBP60709 AC093156.1-201ENST00000440382 670 ntBASIC2.28□□□□□ -2.04
ACTBP60709 RNFT1P2-201ENST00000443064 757 ntBASIC2.28□□□□□ -2.04
ACTBP60709 AC112653.1-201ENST00000443851 386 ntBASIC2.28□□□□□ -2.04
ACTBP60709 OR51B8P-201ENST00000449892 769 ntBASIC2.28□□□□□ -2.04
ACTBP60709 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.28□□□□□ -2.04
ACTBP60709 AL139109.1-201ENST00000455491 297 ntBASIC2.28□□□□□ -2.04
ACTBP60709 AC108729.2-201ENST00000476543 840 ntBASIC2.28□□□□□ -2.04
ACTBP60709 OR52A4P-202ENST00000481634 799 ntBASIC2.28□□□□□ -2.04
ACTBP60709 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.28□□□□□ -2.04
ACTBP60709 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.28□□□□□ -2.04
ACTBP60709 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.28□□□□□ -2.04
ACTBP60709 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.28□□□□□ -2.04
ACTBP60709 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.28□□□□□ -2.04
ACTBP60709 IGLV3-17-201ENST00000519099 244 ntBASIC2.28□□□□□ -2.04
ACTBP60709 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.28□□□□□ -2.04
ACTBP60709 OR4P1P-201ENST00000530808 1136 ntBASIC2.28□□□□□ -2.04
ACTBP60709 TRAV28-201ENST00000557548 323 ntBASIC2.28□□□□□ -2.04
ACTBP60709 MIR3117-201ENST00000584034 78 ntBASIC2.28□□□□□ -2.04
ACTBP60709 AL450270.1-201ENST00000606160 391 ntBASIC2.28□□□□□ -2.04
ACTBP60709 AP005137.2-201ENST00000609238 400 ntBASIC2.28□□□□□ -2.04
ACTBP60709 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.28□□□□□ -2.04
ACTBP60709 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.28□□□□□ -2.04
ACTBP60709 AC079395.3-201ENST00000615161 484 ntBASIC2.28□□□□□ -2.04
ACTBP60709 AC104307.1-201ENST00000616142 196 ntBASIC2.28□□□□□ -2.04
ACTBP60709 RMST_10.1-201ENST00000616309 154 ntBASIC2.28□□□□□ -2.04
ACTBP60709 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.28□□□□□ -2.04
ACTBP60709 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ACTBP60709 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
ACTBP60709 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
ACTBP60709 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.27□□□□□ -2.05
ACTBP60709 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
ACTBP60709 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.27□□□□□ -2.05
ACTBP60709 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ACTBP60709 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
ACTBP60709 RNA5SP210-201ENST00000391034 120 ntBASIC2.27□□□□□ -2.05
ACTBP60709 ATF1P1-201ENST00000406040 927 ntBASIC2.27□□□□□ -2.05
ACTBP60709 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.27□□□□□ -2.05
ACTBP60709 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.27□□□□□ -2.05
ACTBP60709 AL121871.1-201ENST00000443413 436 ntBASIC2.27□□□□□ -2.05
ACTBP60709 AC104389.3-201ENST00000445629 235 ntBASIC2.27□□□□□ -2.05
ACTBP60709 RPS15AP27-201ENST00000449183 343 ntBASIC2.27□□□□□ -2.05
ACTBP60709 AC133134.1-201ENST00000466800 359 ntBASIC2.27□□□□□ -2.05
ACTBP60709 S100A11P2-201ENST00000467589 312 ntBASIC2.27□□□□□ -2.05
ACTBP60709 RPS29P26-201ENST00000477483 171 ntBASIC2.27□□□□□ -2.05
ACTBP60709 AC025181.1-201ENST00000477507 416 ntBASIC2.27□□□□□ -2.05
ACTBP60709 RPS27P27-201ENST00000498779 255 ntBASIC2.27□□□□□ -2.05
ACTBP60709 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ACTBP60709 AL359273.1-201ENST00000510918 627 ntBASIC2.27□□□□□ -2.05
ACTBP60709 BTF3P12-201ENST00000519620 469 ntBASIC2.27□□□□□ -2.05
ACTBP60709 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.27□□□□□ -2.05
ACTBP60709 OR5BN1P-201ENST00000532955 829 ntBASIC2.27□□□□□ -2.05
ACTBP60709 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.27□□□□□ -2.05
ACTBP60709 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.27□□□□□ -2.05
ACTBP60709 MIR3921-201ENST00000577308 85 ntBASIC2.27□□□□□ -2.05
ACTBP60709 SNORD39.3-201ENST00000584451 71 ntBASIC2.27□□□□□ -2.05
ACTBP60709 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
ACTBP60709 AC093732.2-201ENST00000607950 274 ntBASIC2.27□□□□□ -2.05
ACTBP60709 AC104237.2-201ENST00000612456 443 ntBASIC2.27□□□□□ -2.05
ACTBP60709 VN1R7P-201ENST00000619242 903 ntBASIC2.27□□□□□ -2.05
ACTBP60709 AC009318.4-201ENST00000620496 486 ntBASIC2.27□□□□□ -2.05
ACTBP60709 AC079597.1-201ENST00000624306 508 ntBASIC2.27□□□□□ -2.05
ACTBP60709 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
ACTBP60709 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ACTBP60709 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ACTBP60709 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.26□□□□□ -2.05
ACTBP60709 AC009812.4-201ENST00000569134 1805 ntBASIC2.26□□□□□ -2.05
ACTBP60709 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
ACTBP60709 AC008432.1-201ENST00000615912 1320 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms