Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RN7SKP285-201ENST00000410137 318 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 RN7SKP202-201ENST00000410439 330 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 RN7SKP159-201ENST00000410657 292 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 RNU6-248P-201ENST00000410720 107 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN20P56880 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.47□□□□□ -1.85
CLDN20P56880 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN20P56880 EI24P1-201ENST00000416584 867 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN20P56880 CCDC58P2-201ENST00000417131 366 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.47□□□□□ -1.85
CLDN20P56880 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN20P56880 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN20P56880 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.47□□□□□ -1.85
CLDN20P56880 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.47□□□□□ -1.85
CLDN20P56880 AL049734.2-201ENST00000441066 616 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN20P56880 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN20P56880 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN20P56880 HMGB3P30-201ENST00000457863 606 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN20P56880 AC093278.1-201ENST00000494700 600 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN20P56880 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN20P56880 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN20P56880 RN7SKP83-201ENST00000516512 178 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 SCARNA14-201ENST00000516903 136 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 AC022616.6-201ENST00000520479 119 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 AC103783.1-201ENST00000520506 373 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 AC022695.1-201ENST00000522089 237 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN20P56880 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN20P56880 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN20P56880 AP000907.2-201ENST00000530827 353 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN20P56880 RPL21P5-201ENST00000554662 472 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN20P56880 AL157394.1-201ENST00000562983 1224 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN20P56880 AC006130.2-201ENST00000586202 326 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 AC146944.4-201ENST00000602697 718 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 AL451086.1-201ENST00000605596 223 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 AC090425.2-201ENST00000608818 501 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 AC109347.2-201ENST00000610220 349 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 RMST_8.1-201ENST00000610287 165 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 AP001506.1-201ENST00000615444 211 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 AC012150.2-201ENST00000621300 544 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.47□□□□□ -1.85
CLDN20P56880 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.47□□□□□ -1.85
CLDN20P56880 AC010149.2-201ENST00000637608 315 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN20P56880 CEP170P1-201ENST00000502249 4587 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 MTCO1P9-201ENST00000505577 1534 ntBASIC3.47□□□□□ -1.85
CLDN20P56880 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.47□□□□□ -1.85
CLDN20P56880 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLDN20P56880 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.47□□□□□ -1.85
CLDN20P56880 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN20P56880 RIOK3P1-201ENST00000418778 1528 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.46□□□□□ -1.86
CLDN20P56880 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN20P56880 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLDN20P56880 MIR199A2-201ENST00000385289 110 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 HLFP1-201ENST00000402375 499 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 SNORA3.3-201ENST00000408712 125 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.46□□□□□ -1.86
CLDN20P56880 MTND1P21-201ENST00000412991 285 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 MTCO3P12-201ENST00000416718 547 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN20P56880 OR1AA1P-201ENST00000419597 916 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN20P56880 AC233728.2-201ENST00000425348 757 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN20P56880 AL031667.1-201ENST00000440222 725 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.46□□□□□ -1.86
CLDN20P56880 MTND6P13-201ENST00000443510 523 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 RPL17P49-201ENST00000443728 411 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN20P56880 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.46□□□□□ -1.86
CLDN20P56880 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN20P56880 RPL23AP14-201ENST00000468281 468 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 AC055855.1-201ENST00000489563 579 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 RPL7P23-201ENST00000493874 747 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 AC026784.1-201ENST00000507986 352 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 RNU6-405P-201ENST00000516637 110 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 RNU1-45P-201ENST00000517191 141 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN20P56880 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN20P56880 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN20P56880 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN20P56880 AC034105.4-201ENST00000568304 277 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 MIR4528-201ENST00000577763 90 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 AC087499.8-201ENST00000578406 226 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 AC010928.3-201ENST00000587712 541 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.46□□□□□ -1.86
CLDN20P56880 AC068790.2-201ENST00000602601 557 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 AC068790.3-201ENST00000602988 553 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 AC015871.2-201ENST00000603605 948 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 BRDTP1-201ENST00000605735 677 ntBASIC3.46□□□□□ -1.86
CLDN20P56880 AC006566.1-201ENST00000608943 513 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms