Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HDAC4P56524 MTND4P4-201ENST00000439033 1366 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HDAC4P56524 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HDAC4P56524 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.89□□□□□ -1.79
HDAC4P56524 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.89□□□□□ -1.79
HDAC4P56524 MIR7-3-201ENST00000384898 110 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 RNA5SP424-201ENST00000390988 115 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 EI24P2-201ENST00000397776 1076 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 MIR1305-201ENST00000408300 86 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HDAC4P56524 AC091390.3-201ENST00000426478 338 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.89□□□□□ -1.79
HDAC4P56524 EZH2P1-201ENST00000431167 291 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.89□□□□□ -1.79
HDAC4P56524 RPL7P52-201ENST00000449200 742 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.89□□□□□ -1.79
HDAC4P56524 NANOGP10-201ENST00000453325 895 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.89□□□□□ -1.79
HDAC4P56524 snoU109.4-201ENST00000458953 143 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 AL133162.1-201ENST00000463228 453 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 AC079140.3-201ENST00000511111 550 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 AC034159.1-201ENST00000513885 583 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 RN7SKP209-201ENST00000516888 304 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.89□□□□□ -1.79
HDAC4P56524 AL121603.1-201ENST00000553815 142 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 AC006960.3-201ENST00000561845 705 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.89□□□□□ -1.79
HDAC4P56524 MIR4307-201ENST00000582802 84 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.89□□□□□ -1.79
HDAC4P56524 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.89□□□□□ -1.79
HDAC4P56524 AC012557.2-201ENST00000605919 418 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 AC011816.2-201ENST00000607089 556 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 AL590282.1-201ENST00000610379 1136 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.89□□□□□ -1.79
HDAC4P56524 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.89□□□□□ -1.79
HDAC4P56524 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
HDAC4P56524 AP004289.2-201ENST00000444413 1457 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.89□□□□□ -1.79
HDAC4P56524 AC244517.1-201ENST00000606030 2086 ntBASIC3.89□□□□□ -1.79
HDAC4P56524 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HDAC4P56524 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HDAC4P56524 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HDAC4P56524 AC006378.2-201ENST00000623178 2476 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HDAC4P56524 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
HDAC4P56524 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.88□□□□□ -1.79
HDAC4P56524 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HDAC4P56524 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HDAC4P56524 SNORA71.3-201ENST00000362582 128 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 RNU6-623P-201ENST00000363143 105 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 RNU6-744P-201ENST00000365557 107 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HDAC4P56524 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HDAC4P56524 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.88□□□□□ -1.79
HDAC4P56524 SNORA75-201ENST00000384158 137 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 RNU6-1316P-201ENST00000384242 108 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 Y_RNA.548-201ENST00000384656 105 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 RPL7P60-201ENST00000397636 735 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 HSPE1P26-201ENST00000405341 275 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 RN7SKP156-201ENST00000410308 342 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 MTCO1P17-201ENST00000411522 491 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 AC109780.2-201ENST00000413467 845 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 MTCO2P34-201ENST00000421994 607 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 RPS27AP14-201ENST00000422868 454 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 MTCO3P5-201ENST00000433620 714 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.88□□□□□ -1.79
HDAC4P56524 VDAC1P3-201ENST00000434069 851 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 NDUFB1P1-201ENST00000435191 180 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.88□□□□□ -1.79
HDAC4P56524 RPS24P1-201ENST00000438550 371 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.88□□□□□ -1.79
HDAC4P56524 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.88□□□□□ -1.79
HDAC4P56524 ST13P20-201ENST00000447996 1065 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.88□□□□□ -1.79
HDAC4P56524 AP000542.1-201ENST00000448473 371 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 snoU13.8-201ENST00000458890 104 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 RPL7P15-201ENST00000461190 712 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 AP001025.2-201ENST00000490908 477 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 COX7A2P2-201ENST00000505291 250 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HDAC4P56524 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HDAC4P56524 AC006390.1-201ENST00000508068 283 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.88□□□□□ -1.79
HDAC4P56524 MTND3P5-201ENST00000512798 333 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.88□□□□□ -1.79
HDAC4P56524 RN7SKP244-201ENST00000516513 307 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.88□□□□□ -1.79
HDAC4P56524 AP002963.1-201ENST00000530590 184 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.88□□□□□ -1.79
HDAC4P56524 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.88□□□□□ -1.79
HDAC4P56524 AC005951.1-201ENST00000576706 485 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.88□□□□□ -1.79
HDAC4P56524 AL160281.1-201ENST00000605307 311 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 AC055876.5-201ENST00000605667 259 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 AC006023.2-201ENST00000609916 167 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 AC092656.1-203ENST00000624134 423 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 AC025048.6-202ENST00000627667 438 ntBASIC3.88□□□□□ -1.79
HDAC4P56524 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
HDAC4P56524 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms