Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 Y_RNA.367-201ENST00000365544 101 ntBASIC4□□□□□ -1.77
SUMO3P55854 RNU4-48P-201ENST00000365559 182 ntBASIC4□□□□□ -1.77
SUMO3P55854 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4□□□□□ -1.77
SUMO3P55854 RNU6-641P-201ENST00000384006 107 ntBASIC4□□□□□ -1.77
SUMO3P55854 RNU6-483P-201ENST00000384088 108 ntBASIC4□□□□□ -1.77
SUMO3P55854 RNU2-9P-201ENST00000410194 145 ntBASIC4□□□□□ -1.77
SUMO3P55854 RPS20P14-201ENST00000412545 360 ntBASIC4□□□□□ -1.77
SUMO3P55854 OR51A5P-201ENST00000415429 942 ntBASIC4□□□□□ -1.77
SUMO3P55854 TMSB10P2-201ENST00000416049 131 ntBASIC4□□□□□ -1.77
SUMO3P55854 USP9YP27-201ENST00000418455 438 ntBASIC4□□□□□ -1.77
SUMO3P55854 AC018630.2-202ENST00000422992 927 ntBASIC4□□□□□ -1.77
SUMO3P55854 MTCO1P20-201ENST00000425366 358 ntBASIC4□□□□□ -1.77
SUMO3P55854 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4□□□□□ -1.77
SUMO3P55854 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4□□□□□ -1.77
SUMO3P55854 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4□□□□□ -1.77
SUMO3P55854 VDAC1P3-201ENST00000434069 851 ntBASIC4□□□□□ -1.77
SUMO3P55854 AL596276.1-201ENST00000434465 418 ntBASIC4□□□□□ -1.77
SUMO3P55854 MTATP6P16-201ENST00000434543 526 ntBASIC4□□□□□ -1.77
SUMO3P55854 RPL7P54-201ENST00000438336 674 ntBASIC4□□□□□ -1.77
SUMO3P55854 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4□□□□□ -1.77
SUMO3P55854 AC083798.1-201ENST00000472671 131 ntBASIC4□□□□□ -1.77
SUMO3P55854 AC092451.1-201ENST00000480211 153 ntBASIC4□□□□□ -1.77
SUMO3P55854 MTAPP1-201ENST00000489154 819 ntBASIC4□□□□□ -1.77
SUMO3P55854 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4□□□□□ -1.77
SUMO3P55854 AC116562.3-201ENST00000506136 177 ntBASIC4□□□□□ -1.77
SUMO3P55854 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4□□□□□ -1.77
SUMO3P55854 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4□□□□□ -1.77
SUMO3P55854 Y_RNA.704-201ENST00000516851 102 ntBASIC4□□□□□ -1.77
SUMO3P55854 IGKV2D-23-201ENST00000518179 286 ntBASIC4□□□□□ -1.77
SUMO3P55854 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4□□□□□ -1.77
SUMO3P55854 AP001646.1-201ENST00000527936 915 ntBASIC4□□□□□ -1.77
SUMO3P55854 AC068587.5-201ENST00000528506 175 ntBASIC4□□□□□ -1.77
SUMO3P55854 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4□□□□□ -1.77
SUMO3P55854 AC100770.1-201ENST00000532310 322 ntBASIC4□□□□□ -1.77
SUMO3P55854 OR5BN1P-201ENST00000532955 829 ntBASIC4□□□□□ -1.77
SUMO3P55854 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4□□□□□ -1.77
SUMO3P55854 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4□□□□□ -1.77
SUMO3P55854 AL352979.3-201ENST00000553515 247 ntBASIC4□□□□□ -1.77
SUMO3P55854 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4□□□□□ -1.77
SUMO3P55854 MIR3921-201ENST00000577308 85 ntBASIC4□□□□□ -1.77
SUMO3P55854 AC006504.3-201ENST00000586818 523 ntBASIC4□□□□□ -1.77
SUMO3P55854 AC093788.1-201ENST00000609356 927 ntBASIC4□□□□□ -1.77
SUMO3P55854 AL138721.1-201ENST00000616756 179 ntBASIC4□□□□□ -1.77
SUMO3P55854 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4□□□□□ -1.77
SUMO3P55854 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4□□□□□ -1.77
SUMO3P55854 AC010733.2-201ENST00000589496 5702 ntBASIC4□□□□□ -1.77
SUMO3P55854 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SUMO3P55854 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
SUMO3P55854 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4□□□□□ -1.77
SUMO3P55854 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4□□□□□ -1.77
SUMO3P55854 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SUMO3P55854 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4□□□□□ -1.77
SUMO3P55854 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4□□□□□ -1.77
SUMO3P55854 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4□□□□□ -1.77
SUMO3P55854 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
SUMO3P55854 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SUMO3P55854 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SUMO3P55854 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4□□□□□ -1.77
SUMO3P55854 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SUMO3P55854 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SUMO3P55854 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SUMO3P55854 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
SUMO3P55854 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SUMO3P55854 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SUMO3P55854 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SUMO3P55854 XIAPP3-201ENST00000312918 795 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 AC067945.1-201ENST00000342609 618 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 RNU6-600P-201ENST00000362524 99 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SUMO3P55854 MIR454-201ENST00000390180 115 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 RNU6-1158P-201ENST00000391167 107 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SUMO3P55854 SNORA11F-201ENST00000408237 128 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 ELOCP19-201ENST00000411919 318 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.99□□□□□ -1.77
SUMO3P55854 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.99□□□□□ -1.77
SUMO3P55854 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.99□□□□□ -1.77
SUMO3P55854 EIF1P3-201ENST00000423841 334 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 ELOCP14-201ENST00000428070 331 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.99□□□□□ -1.77
SUMO3P55854 ELOCP7-201ENST00000439968 331 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 RBMX2P4-201ENST00000441256 376 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.99□□□□□ -1.77
SUMO3P55854 FDX1P2-201ENST00000450769 375 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.99□□□□□ -1.77
SUMO3P55854 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.99□□□□□ -1.77
SUMO3P55854 snoU13.1-201ENST00000459157 104 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 RN7SL738P-201ENST00000470264 297 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
SUMO3P55854 AC092989.1-201ENST00000481235 277 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 RPL23AP55-201ENST00000498163 452 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 RPS27AP13-201ENST00000498403 237 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 AC093824.1-201ENST00000508796 343 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
SUMO3P55854 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.99□□□□□ -1.77
SUMO3P55854 AC021146.3-201ENST00000511911 260 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 RNA5SP464-201ENST00000516251 108 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.99□□□□□ -1.77
SUMO3P55854 OR5D17P-201ENST00000531492 978 ntBASIC3.99□□□□□ -1.77
SUMO3P55854 AL133241.1-201ENST00000556832 487 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms