Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC244517.1-201ENST00000606030 2086 ntBASIC3.34□□□□□ -1.88
VCPP55072 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
VCPP55072 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
VCPP55072 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
VCPP55072 AL161449.1-201ENST00000414531 1199 ntBASIC3.33□□□□□ -1.88
VCPP55072 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.33□□□□□ -1.88
VCPP55072 MRPS36P1-201ENST00000421291 307 ntBASIC3.33□□□□□ -1.88
VCPP55072 AC092648.1-201ENST00000425870 423 ntBASIC3.33□□□□□ -1.88
VCPP55072 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.33□□□□□ -1.88
VCPP55072 AL353705.1-201ENST00000433468 480 ntBASIC3.33□□□□□ -1.88
VCPP55072 USP9YP24-201ENST00000434374 697 ntBASIC3.33□□□□□ -1.88
VCPP55072 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.33□□□□□ -1.88
VCPP55072 EEF1A1P39-201ENST00000440791 250 ntBASIC3.33□□□□□ -1.88
VCPP55072 USP9YP17-201ENST00000444617 696 ntBASIC3.33□□□□□ -1.88
VCPP55072 AL513124.1-201ENST00000450410 614 ntBASIC3.33□□□□□ -1.88
VCPP55072 AC093392.2-201ENST00000450682 337 ntBASIC3.33□□□□□ -1.88
VCPP55072 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.33□□□□□ -1.88
VCPP55072 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.33□□□□□ -1.88
VCPP55072 AC108734.3-201ENST00000481241 1165 ntBASIC3.33□□□□□ -1.88
VCPP55072 AC134050.1-201ENST00000495088 933 ntBASIC3.33□□□□□ -1.88
VCPP55072 RNU6-415P-201ENST00000516252 97 ntBASIC3.33□□□□□ -1.88
VCPP55072 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.33□□□□□ -1.88
VCPP55072 AC245166.1-201ENST00000521012 253 ntBASIC3.33□□□□□ -1.88
VCPP55072 AC022690.1-201ENST00000526681 550 ntBASIC3.33□□□□□ -1.88
VCPP55072 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.33□□□□□ -1.88
VCPP55072 AL132857.1-201ENST00000555180 708 ntBASIC3.33□□□□□ -1.88
VCPP55072 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.33□□□□□ -1.88
VCPP55072 MIR4319-201ENST00000577285 85 ntBASIC3.33□□□□□ -1.88
VCPP55072 MIR2682-201ENST00000580305 110 ntBASIC3.33□□□□□ -1.88
VCPP55072 SNORD84-203ENST00000584275 78 ntBASIC3.33□□□□□ -1.88
VCPP55072 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.33□□□□□ -1.88
VCPP55072 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.33□□□□□ -1.88
VCPP55072 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.33□□□□□ -1.88
VCPP55072 AL591516.1-201ENST00000611326 274 ntBASIC3.33□□□□□ -1.88
VCPP55072 AL355810.1-201ENST00000614629 552 ntBASIC3.33□□□□□ -1.88
VCPP55072 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.33□□□□□ -1.88
VCPP55072 AC090897.3-201ENST00000636973 1157 ntBASIC3.33□□□□□ -1.88
VCPP55072 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
VCPP55072 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VCPP55072 FAM35CP-201ENST00000554755 2470 ntBASIC3.33□□□□□ -1.88
VCPP55072 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VCPP55072 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
VCPP55072 MTND5P24-201ENST00000438892 1767 ntBASIC3.33□□□□□ -1.88
VCPP55072 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VCPP55072 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
VCPP55072 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
VCPP55072 RNU6-657P-201ENST00000383904 107 ntBASIC3.32□□□□□ -1.88
VCPP55072 RPS3AP26-201ENST00000398259 784 ntBASIC3.32□□□□□ -1.88
VCPP55072 RNU2-28P-201ENST00000410457 189 ntBASIC3.32□□□□□ -1.88
VCPP55072 RNU6-1077P-201ENST00000410506 102 ntBASIC3.32□□□□□ -1.88
VCPP55072 RNU6-712P-201ENST00000410558 100 ntBASIC3.32□□□□□ -1.88
VCPP55072 RNU2-42P-201ENST00000410697 113 ntBASIC3.32□□□□□ -1.88
VCPP55072 NDUFB4P5-201ENST00000415445 361 ntBASIC3.32□□□□□ -1.88
VCPP55072 NPM1P11-201ENST00000417106 855 ntBASIC3.32□□□□□ -1.88
VCPP55072 AL356320.2-201ENST00000417263 507 ntBASIC3.32□□□□□ -1.88
VCPP55072 AC233728.2-201ENST00000425348 757 ntBASIC3.32□□□□□ -1.88
VCPP55072 DUTP6-201ENST00000425573 462 ntBASIC3.32□□□□□ -1.88
VCPP55072 AC079780.1-201ENST00000428259 207 ntBASIC3.32□□□□□ -1.88
VCPP55072 AC010095.1-201ENST00000443543 144 ntBASIC3.32□□□□□ -1.88
VCPP55072 FDX1P2-201ENST00000450769 375 ntBASIC3.32□□□□□ -1.88
VCPP55072 RFC5P1-201ENST00000454419 874 ntBASIC3.32□□□□□ -1.88
VCPP55072 AC096751.1-202ENST00000502691 1067 ntBASIC3.32□□□□□ -1.88
VCPP55072 RNU6-1225P-201ENST00000516336 65 ntBASIC3.32□□□□□ -1.88
VCPP55072 RNU6-1261P-201ENST00000517194 104 ntBASIC3.32□□□□□ -1.88
VCPP55072 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.32□□□□□ -1.88
VCPP55072 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.32□□□□□ -1.88
VCPP55072 AP001330.4-201ENST00000604350 154 ntBASIC3.32□□□□□ -1.88
VCPP55072 AC106052.1-201ENST00000608029 497 ntBASIC3.32□□□□□ -1.88
VCPP55072 AC027449.1-201ENST00000608890 407 ntBASIC3.32□□□□□ -1.88
VCPP55072 AP000240.1-201ENST00000609910 452 ntBASIC3.32□□□□□ -1.88
VCPP55072 AC005332.6-201ENST00000613178 446 ntBASIC3.32□□□□□ -1.88
VCPP55072 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.32□□□□□ -1.88
VCPP55072 MIR7843-201ENST00000622274 79 ntBASIC3.32□□□□□ -1.88
VCPP55072 AC073348.1-201ENST00000623002 331 ntBASIC3.32□□□□□ -1.88
VCPP55072 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.32□□□□□ -1.88
VCPP55072 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
VCPP55072 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.32□□□□□ -1.88
VCPP55072 AC093010.3-201ENST00000570269 15214 ntBASIC3.32□□□□□ -1.88
VCPP55072 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VCPP55072 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
VCPP55072 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
VCPP55072 SGO1P2-201ENST00000429458 1589 ntBASIC3.31□□□□□ -1.88
VCPP55072 API5P2-201ENST00000397055 1498 ntBASIC3.31□□□□□ -1.88
VCPP55072 OR5BR1P-201ENST00000524992 1330 ntBASIC3.31□□□□□ -1.88
VCPP55072 RNU5D-1-201ENST00000363299 116 ntBASIC3.31□□□□□ -1.88
VCPP55072 RNU4-68P-201ENST00000364314 141 ntBASIC3.31□□□□□ -1.88
VCPP55072 SNORA72.3-201ENST00000365074 132 ntBASIC3.31□□□□□ -1.88
VCPP55072 RNU6-413P-201ENST00000384115 107 ntBASIC3.31□□□□□ -1.88
VCPP55072 SNORA51.6-201ENST00000384151 125 ntBASIC3.31□□□□□ -1.88
VCPP55072 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.31□□□□□ -1.88
VCPP55072 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.31□□□□□ -1.88
VCPP55072 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.31□□□□□ -1.88
VCPP55072 AL513175.2-201ENST00000422071 443 ntBASIC3.31□□□□□ -1.88
VCPP55072 AL139281.1-201ENST00000422120 335 ntBASIC3.31□□□□□ -1.88
VCPP55072 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.31□□□□□ -1.88
VCPP55072 SNRPEP4-201ENST00000435815 279 ntBASIC3.31□□□□□ -1.88
VCPP55072 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.31□□□□□ -1.88
VCPP55072 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.31□□□□□ -1.88
VCPP55072 AC108938.1-201ENST00000451204 136 ntBASIC3.31□□□□□ -1.88
VCPP55072 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms