Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 AC091544.4-201ENST00000555268 342 ntBASIC4.08□□□□□ -1.76
CTCFP49711 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.08□□□□□ -1.76
CTCFP49711 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.08□□□□□ -1.76
CTCFP49711 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.08□□□□□ -1.76
CTCFP49711 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.08□□□□□ -1.76
CTCFP49711 AC072039.2-201ENST00000608883 439 ntBASIC4.08□□□□□ -1.76
CTCFP49711 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.08□□□□□ -1.76
CTCFP49711 AC007671.2-201ENST00000637344 619 ntBASIC4.08□□□□□ -1.76
CTCFP49711 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTCFP49711 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CTCFP49711 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTCFP49711 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CTCFP49711 AC011477.1-204ENST00000623416 1325 ntBASIC4.07□□□□□ -1.76
CTCFP49711 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CTCFP49711 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CTCFP49711 RNU6-821P-201ENST00000390995 107 ntBASIC4.07□□□□□ -1.76
CTCFP49711 RNU4-78P-201ENST00000410940 126 ntBASIC4.07□□□□□ -1.76
CTCFP49711 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.07□□□□□ -1.76
CTCFP49711 RPL30P2-201ENST00000414021 291 ntBASIC4.07□□□□□ -1.76
CTCFP49711 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.07□□□□□ -1.76
CTCFP49711 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.07□□□□□ -1.76
CTCFP49711 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.07□□□□□ -1.76
CTCFP49711 AC003685.2-201ENST00000422795 395 ntBASIC4.07□□□□□ -1.76
CTCFP49711 AC007742.1-201ENST00000425789 329 ntBASIC4.07□□□□□ -1.76
CTCFP49711 AL590233.1-201ENST00000430017 456 ntBASIC4.07□□□□□ -1.76
CTCFP49711 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.07□□□□□ -1.76
CTCFP49711 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.07□□□□□ -1.76
CTCFP49711 ELOCP26-201ENST00000436067 329 ntBASIC4.07□□□□□ -1.76
CTCFP49711 RNU7-125P-201ENST00000458760 62 ntBASIC4.07□□□□□ -1.76
CTCFP49711 RN7SL93P-201ENST00000463035 293 ntBASIC4.07□□□□□ -1.76
CTCFP49711 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.07□□□□□ -1.76
CTCFP49711 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.07□□□□□ -1.76
CTCFP49711 RNU6-1231P-201ENST00000517185 103 ntBASIC4.07□□□□□ -1.76
CTCFP49711 AC239860.2-201ENST00000525886 270 ntBASIC4.07□□□□□ -1.76
CTCFP49711 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.07□□□□□ -1.76
CTCFP49711 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CTCFP49711 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.07□□□□□ -1.76
CTCFP49711 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.07□□□□□ -1.76
CTCFP49711 AC090616.2-202ENST00000584248 222 ntBASIC4.07□□□□□ -1.76
CTCFP49711 AC138932.5-201ENST00000617759 563 ntBASIC4.07□□□□□ -1.76
CTCFP49711 AC079248.2-201ENST00000623779 326 ntBASIC4.07□□□□□ -1.76
CTCFP49711 AC091925.2-201ENST00000625059 256 ntBASIC4.07□□□□□ -1.76
CTCFP49711 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.07□□□□□ -1.76
CTCFP49711 AC244205.2-202ENST00000635781 342 ntBASIC4.07□□□□□ -1.76
CTCFP49711 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CTCFP49711 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.07□□□□□ -1.76
CTCFP49711 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.06□□□□□ -1.76
CTCFP49711 AC097714.1-201ENST00000511272 1647 ntBASIC4.06□□□□□ -1.76
CTCFP49711 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTCFP49711 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTCFP49711 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.06□□□□□ -1.76
CTCFP49711 RPL21P132-201ENST00000331267 462 ntBASIC4.06□□□□□ -1.76
CTCFP49711 RNU6-462P-201ENST00000362659 105 ntBASIC4.06□□□□□ -1.76
CTCFP49711 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.06□□□□□ -1.76
CTCFP49711 AL031679.1-201ENST00000400616 525 ntBASIC4.06□□□□□ -1.76
CTCFP49711 MIR887-201ENST00000401258 79 ntBASIC4.06□□□□□ -1.76
CTCFP49711 AL391417.1-201ENST00000404100 426 ntBASIC4.06□□□□□ -1.76
CTCFP49711 AL357075.1-201ENST00000404107 726 ntBASIC4.06□□□□□ -1.76
CTCFP49711 MTHFD2P2-201ENST00000407725 247 ntBASIC4.06□□□□□ -1.76
CTCFP49711 RNU2-15P-201ENST00000410692 191 ntBASIC4.06□□□□□ -1.76
CTCFP49711 RNA5SP247-201ENST00000411181 105 ntBASIC4.06□□□□□ -1.76
CTCFP49711 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTCFP49711 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.06□□□□□ -1.76
CTCFP49711 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.06□□□□□ -1.76
CTCFP49711 MTND2P18-201ENST00000419962 1030 ntBASIC4.06□□□□□ -1.76
CTCFP49711 USP9YP26-201ENST00000421008 661 ntBASIC4.06□□□□□ -1.76
CTCFP49711 MTND4P20-201ENST00000424125 869 ntBASIC4.06□□□□□ -1.76
CTCFP49711 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.06□□□□□ -1.76
CTCFP49711 MTND1P20-201ENST00000430341 950 ntBASIC4.06□□□□□ -1.76
CTCFP49711 EZH2P1-201ENST00000431167 291 ntBASIC4.06□□□□□ -1.76
CTCFP49711 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.06□□□□□ -1.76
CTCFP49711 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.06□□□□□ -1.76
CTCFP49711 AL117351.1-201ENST00000438864 766 ntBASIC4.06□□□□□ -1.76
CTCFP49711 MTND5P14-201ENST00000441481 1267 ntBASIC4.06□□□□□ -1.76
CTCFP49711 HSPE1P28-201ENST00000443139 211 ntBASIC4.06□□□□□ -1.76
CTCFP49711 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.06□□□□□ -1.76
CTCFP49711 OR6K5P-201ENST00000447050 945 ntBASIC4.06□□□□□ -1.76
CTCFP49711 OR6C5P-201ENST00000452388 923 ntBASIC4.06□□□□□ -1.76
CTCFP49711 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.06□□□□□ -1.76
CTCFP49711 AL136097.1-201ENST00000456945 913 ntBASIC4.06□□□□□ -1.76
CTCFP49711 ARPC3P2-201ENST00000457786 533 ntBASIC4.06□□□□□ -1.76
CTCFP49711 RNU7-170P-201ENST00000459303 61 ntBASIC4.06□□□□□ -1.76
CTCFP49711 RPL21P104-201ENST00000464143 478 ntBASIC4.06□□□□□ -1.76
CTCFP49711 HMGB1P25-201ENST00000468402 607 ntBASIC4.06□□□□□ -1.76
CTCFP49711 SNRPGP3-201ENST00000469405 227 ntBASIC4.06□□□□□ -1.76
CTCFP49711 AC087312.1-201ENST00000471411 480 ntBASIC4.06□□□□□ -1.76
CTCFP49711 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.06□□□□□ -1.76
CTCFP49711 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.06□□□□□ -1.76
CTCFP49711 MTND1P22-201ENST00000510572 951 ntBASIC4.06□□□□□ -1.76
CTCFP49711 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.06□□□□□ -1.76
CTCFP49711 MTCYBP41-201ENST00000528913 1123 ntBASIC4.06□□□□□ -1.76
CTCFP49711 AC007834.2-201ENST00000536310 343 ntBASIC4.06□□□□□ -1.76
CTCFP49711 AC136618.2-201ENST00000575091 400 ntBASIC4.06□□□□□ -1.76
CTCFP49711 AC068313.1-201ENST00000604028 1008 ntBASIC4.06□□□□□ -1.76
CTCFP49711 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC4.06□□□□□ -1.76
CTCFP49711 AC004223.4-201ENST00000612426 332 ntBASIC4.06□□□□□ -1.76
CTCFP49711 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTCFP49711 AL357080.1-201ENST00000617394 239 ntBASIC4.06□□□□□ -1.76
CTCFP49711 AL031667.3-201ENST00000620124 655 ntBASIC4.06□□□□□ -1.76
CTCFP49711 AC079684.1-201ENST00000621405 437 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms